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H1-18-all-fractions_k255_5255699

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5255699_1
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42..620)
DNA (579bp) protein (193aa)
membrane protein n=1 Tax=Massilia niastensis RepID=UPI00036EF7A8
Putative membrane protein {ECO:0000313|EMBL:KFC73568.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
transmembrane protein
H1-18-all-fractions_k255_5255699_2
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

719..2251
DNA (1533bp) protein (511aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ilvA; threonine ammonia-lyase, biosynthetic (EC:4.3.1.19)
L-threonine dehydratase biosynthetic IlvA n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000366EA68
H1-18-all-fractions_k255_5255699_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2268..3113
DNA (846bp) protein (282aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
queF; 7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
7-cyano-7-deazaguanine reductase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037AF984
H1-18-all-fractions_k255_5255699_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3308..3790
DNA (483bp) protein (161aa)
ptsN; PTS system, nitrogen regulatory IIA protein (EC:2.7.1.69)
PTS sugar transporter subunit IIA n=1 Tax=Massilia niastensis RepID=UPI0003769030
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:KFC73571.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H1-18-all-fractions_k255_5255699_5
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3839..4774
DNA (936bp) protein (312aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
HPr kinase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035D10C0
HPr Serine kinase N terminus family protein
H1-18-all-fractions_k255_5255699_6
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4836..5066
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J2QWZ1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EUC21171.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
hypothetical protein
H1-18-all-fractions_k255_5255699_7
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5127..5990
DNA (864bp) protein (288aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003742E44
P-loop ATPase family protein
Nucleotide-binding protein GJA_4863 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_5255699_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6095..7177)
DNA (1083bp) protein (361aa)
enoyl(3-hydroxyisobutyryl)-coenzyme A hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037298D4
3-hydroxyisobutyryl-CoA hydrolase {ECO:0000313|EMBL:KGF79085.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H1-18-all-fractions_k255_5255699_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7291..7647)
DNA (357bp) protein (119aa)
ribosome hibernation promoting factor n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003776E18
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KHA80523.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
raiA; ribosomal subunit interface protein
H1-18-all-fractions_k255_5255699_10
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7726..9219)
DNA (1494bp) protein (498aa)
RNA polymerase subunit sigma-54 n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036FF201
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
rpoN; RNA polymerase sigma-54 factor
H1-18-all-fractions_k255_5255699_11
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9234..9992)
DNA (759bp) protein (253aa)
ABC transporter n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036A7BF9
Putative lipopolysaccharide transport periplasmic protein LptB {ECO:0000313|EMBL:ELX12231.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
ABC transporter family protein
H1-18-all-fractions_k255_5255699_12
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9989..10630)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034BBEA8
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
lptA; lipopolysaccharide transport periplasmic protein LptA
H1-18-all-fractions_k255_5255699_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10663..11277)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036C119E
Lipopolysaccharide assembly protein, LptC-like family {ECO:0000313|EMBL:KGF79080.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
H1-18-all-fractions_k255_5255699_14
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11280..11828)
DNA (549bp) protein (183aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037341A1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:KFI08005.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
H1-18-all-fractions_k255_5255699_15
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11828..12826)
DNA (999bp) protein (333aa)
KpsF/GutQ family protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037D0744
sugar isomerase, KpsF/GutQ family protein
Sugar isomerase, KpsF/GutQ family protein {ECO:0000313|EMBL:CDG85474.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_5255699_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12836..14935
DNA (2100bp) protein (700aa)
potassium transporter n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037C83CA
Potassium transporter {ECO:0000313|EMBL:KGF79077.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
kefB; Glutathione-regulated potassium-efflux system protein KefB
H1-18-all-fractions_k255_5255699_17
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14942..16072)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037A78DB
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKU84197.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H1-18-all-fractions_k255_5255699_18
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16217..17062)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIS6_9BURK
Fe-S protein {ECO:0000313|EMBL:KFI08009.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
putative iron-sulfur binding protein
H1-18-all-fractions_k255_5255699_19
unknown

Not on your lists

17339..18022
DNA (684bp) protein (228aa)

This feature has no annotations

H1-18-all-fractions_k255_5255699_20
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18217..19308)
DNA (1092bp) protein (364aa)
GTP-binding protein YchF n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003782199
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
GTPase of unknown function family protein
H1-18-all-fractions_k255_5255699_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19432..20514)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000371CDA2
FabD/lysophospholipase-like protein {ECO:0000313|EMBL:KGF79053.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H1-18-all-fractions_k255_5255699_22
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20657..21220
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D9D2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80798.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H1-18-all-fractions_k255_5255699_23
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21217..21561
DNA (345bp) protein (115aa)
RES domain-containing protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCC5_9BURK
RES domain-containing protein {ECO:0000313|EMBL:ELX09267.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
H1-18-all-fractions_k255_5255699_24
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21561..21695
DNA (135bp) protein (45aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000369E34E
RES domain-containing protein {ECO:0000313|EMBL:ELX09267.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
RES domain protein
H1-18-all-fractions_k255_5255699_25
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21832..22554
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D5Y8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU79698.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H1-18-all-fractions_k255_5255699_26
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22566..23738
DNA (1173bp) protein (391aa)
Putative oxidoreductase, Zn-dependent and NAD(P)-binding n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B5K9_METEA
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:KIG10094.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
putative oxidoreductase, Zn-dependent and NAD(P)-binding
H1-18-all-fractions_k255_5255699_27
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23752..24336)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIT2_9BURK
H1-18-all-fractions_k255_5255699_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24432..25058)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037DA415
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ribosomal protein L25, Ctc-form
H1-18-all-fractions_k255_5255699_29
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25230..26180)
DNA (951bp) protein (317aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E458_9BURK
H1-18-all-fractions_k255_5255699_30
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26469..27374)
DNA (906bp) protein (302aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003809F0B
Displaying items 1-30 of 35 in total

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