ggKbase home page

H1-18-all-fractions_k255_5958208

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5958208_1
unknown

Not on your lists

202..1587
DNA (1386bp) protein (462aa)

This feature has no annotations

H1-18-all-fractions_k255_5958208_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

1655..2323
DNA (669bp) protein (223aa)
Uracil-DNA glycosylase superfamily id=3293342 bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
uracil-DNA glycosylase superfamily
Tax=GWC2_RIF_CHLX_73_18_curated
H1-18-all-fractions_k255_5958208_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2368..4284
DNA (1917bp) protein (639aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAH6_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ40819.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
H1-18-all-fractions_k255_5958208_4
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4251..4739)
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Streptomyces sp. C RepID=D9VYJ0_9ACTO
Acetyltransferase {ECO:0000313|EMBL:EFL17518.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
GCN5-related N-acetyltransferase
H1-18-all-fractions_k255_5958208_5
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4790..5269
DNA (480bp) protein (160aa)
Transcriptional regulator n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BMK6_MYCCN
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFM18513.1}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
H1-18-all-fractions_k255_5958208_6
unknown

Not on your lists

comp(5273..6271)
DNA (999bp) protein (333aa)

This feature has no annotations

H1-18-all-fractions_k255_5958208_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6331..6822
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Dietzia alimentaria RepID=UPI00029B2CDE
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6871..7587
DNA (717bp) protein (239aa)
prmA; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B6366D
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7601..8083)
DNA (483bp) protein (161aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Frankia sp. EUN1f RepID=D3CUQ0_9ACTO
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8132..9121
DNA (990bp) protein (330aa)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U6D1_9PROT
dihydroorotate dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

9188..10288
DNA (1101bp) protein (367aa)
spermidine/putrescine ABC transporter ATPase id=14629980 bin=bin8_Chloro species=Sporichthya polymorpha genus=Sporichthya taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
ABC transporter ATP-binding protein
Tax=RBG_16_RIF_CHLX_72_14_curated
H1-18-all-fractions_k255_5958208_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10285..11511
DNA (1227bp) protein (409aa)
Spermidine/putrescine-binding periplasmic protein id=4195234 bin=GWC2_Chloroflexi_73_18 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
spermidine/putrescine-binding periplasmic protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11568..12476
DNA (909bp) protein (303aa)
spermidine/putrescine ABC transporter permease id=4195233 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
spermidine/putrescine ABC transporter permease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12485..13318
DNA (834bp) protein (278aa)
ABC transporter permease protein id=4195232 bin=GWC2_Chloroflexi_73_18 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter permease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13315..13833)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI0003795358
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13859..15199)
DNA (1341bp) protein (447aa)
Peptidase M20 n=1 Tax=Patulibacter medicamentivorans RepID=H0E3Z0_9ACTN
peptidase M20
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(15237..15902)
DNA (666bp) protein (222aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W086_DYAFD
pyridoxamine 5'-phosphate oxidase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16058..16417
DNA (360bp) protein (120aa)
OmpR subfamily protein RpaA/Ycf27/Crr31/Rre31 n=6 Tax=Synechocystis sp. PCC 6803 RepID=F7UU03_SYNYG
Two-component response regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_19
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


16414..18087
DNA (1674bp) protein (558aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SKV7_9BACL
Tax=RBG_16_Actinobacteria_70_17_curated
H1-18-all-fractions_k255_5958208_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

18208..19500
DNA (1293bp) protein (431aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=uncultured bacterium A1Q1_fos_15 RepID=L7W1F6_9BACT
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19497..20594
DNA (1098bp) protein (366aa)
threonine synthase n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000361A57F
threonine synthase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_22
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

20608..21504
DNA (897bp) protein (299aa)
Homoserine kinase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y714_THEBD
homoserine kinase
Tax=RBG_13_Acidobacteria_68_16_curated
H1-18-all-fractions_k255_5958208_23
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

21497..22279
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC38_THET1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ42353.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
H1-18-all-fractions_k255_5958208_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22291..23073
DNA (783bp) protein (261aa)
Metallophosphoesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF9_RUBXD
putative phosphohydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_25
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

23104..24450
DNA (1347bp) protein (449aa)
Cyclic 2,3-diphosphoglycerate synthetase {ECO:0000255|HAMAP-Rule:MF_01908}; Short=cDPGS {ECO:0000255|HAMAP-Rule:MF_01908};; EC=6.5.-.- {ECO:0000255|HAMAP-Rule:MF_01908};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Cyclic 2,3-diphosphoglycerate synthetase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=CPGS_RUBXD
cyclic 2,3-diphosphoglycerate-synthetase
H1-18-all-fractions_k255_5958208_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

24447..25454
DNA (1008bp) protein (336aa)
ATP-cone domain protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) PF3_MARHT">RepID=F2NPF3_MARHT
ATP-cone domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

25484..26152
DNA (669bp) protein (223aa)
transaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLK8_THEM7
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H1-18-all-fractions_k255_5958208_28
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26152..27828
DNA (1677bp) protein (559aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Transcription termination factor Rho n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y715_THEBD
transcription termination factor Rho
H1-18-all-fractions_k255_5958208_29
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


27882..28109
DNA (228bp) protein (76aa)
50S ribosomal protein L31 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M176_ACIFD
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
H1-18-all-fractions_k255_5958208_30
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

28113..29033
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XDJ2_THEPJ
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying items 1-30 of 33 in total

View Taxonomy