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H1-18-all-fractions_metab_conc_61

wsip-metawrap-drep-bins_Actinobacteria_70_3
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 101-150 of 230 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H1-18-all-fractions_k255_5632220
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (84.38%)
32 33244 bp 71.14 4.23 94.62
H1-18-all-fractions_k255_6072048
Class: Actinobacteria (50%)
4 4443 bp 69.05 1.96 94.67
H1-18-all-fractions_k255_5700226
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (50%)
8 7771 bp 68.33 2.20 94.70
H1-18-all-fractions_k255_6574614
Domain: Bacteria (77.78%)
9 6760 bp 69.05 1.66 94.70
H1-18-all-fractions_k255_353897
Phylum: Actinobacteria (100%)
5 4303 bp 71.46 1.85 94.75
H1-18-all-fractions_k255_5588828
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (52%)
25 26678 bp 69.90 1.89 94.77
H1-18-all-fractions_k255_2073239
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (77.27%)
22 21067 bp 71.65 2.71 94.81
H1-18-all-fractions_k255_3882931
Domain: Bacteria (57.14%)
7 5410 bp 68.43 2.33 94.82
H1-18-all-fractions_k255_1946389
Phylum: Actinobacteria (50%)
12 13292 bp 68.94 3.31 94.84
H1-18-all-fractions_k255_6254441
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (83.33%)
12 9134 bp 71.64 2.40 94.85
H1-18-all-fractions_k255_5096647
Domain: Bacteria (81.82%)
11 11000 bp 67.12 1.66 94.96
H1-18-all-fractions_k255_5192853
Domain: Bacteria (85.71%)
7 6103 bp 71.08 3.74 94.97
H1-18-all-fractions_k255_4184023
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (50%)
12 12630 bp 70.45 2.17 94.99
H1-18-all-fractions_k255_5827633
Phylum: Actinobacteria (57.89%)
19 20436 bp 67.19 0.92 95.02
H1-18-all-fractions_k255_6877707
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (50%)
6 5916 bp 70.32 1.62 95.03
H1-18-all-fractions_k255_4088848
Phylum: Actinobacteria (50%)
10 8153 bp 70.04 2.28 95.04
H1-18-all-fractions_k255_3792574
Phylum: Actinobacteria (71.43%)
7 8123 bp 69.79 2.18 95.06
H1-18-all-fractions_k255_1077666
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (50%)
12 9252 bp 69.51 2.79 95.07
H1-18-all-fractions_k255_949652
Phylum: Actinobacteria (57.14%)
7 5989 bp 71.01 2.78 95.07
H1-18-all-fractions_k255_5174274
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (100%)
12 9497 bp 70.78 2.48 95.11
H1-18-all-fractions_k255_1539643
Phylum: Actinobacteria (76.92%)
13 11769 bp 68.22 2.24 95.16
H1-18-all-fractions_k255_901238
Phylum: Actinobacteria (63.64%)
11 9581 bp 70.63 2.35 95.22
H1-18-all-fractions_k255_3421869
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (100%)
5 4196 bp 68.42 2.75 95.23
H1-18-all-fractions_k255_5868420
Phylum: Actinobacteria (77.78%)
9 8854 bp 70.05 2.42 95.25
H1-18-all-fractions_k255_5070979
Class: Actinobacteria (50%)
4 5438 bp 70.17 1.60 95.27
H1-18-all-fractions_k255_5182928
Domain: Bacteria (80%)
5 5578 bp 70.26 3.23 95.36
H1-18-all-fractions_k255_3211284
Domain: Bacteria (87.5%)
8 8991 bp 71.52 1.95 95.40
H1-18-all-fractions_k255_7106812
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (66.67%)
12 10655 bp 67.10 2.39 95.48
H1-18-all-fractions_k255_5769029
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (66.67%)
6 5158 bp 69.93 2.50 95.50
H1-18-all-fractions_k255_798807
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (50%)
16 17277 bp 69.85 3.26 95.55
H1-18-all-fractions_k255_1654772
Phylum: Actinobacteria (73.68%)
19 17770 bp 70.92 2.49 95.57
H1-18-all-fractions_k255_3199595
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (91.67%)
12 10600 bp 69.94 2.87 95.66
H1-18-all-fractions_k255_4951311
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (54.55%)
11 9844 bp 69.08 4.46 95.66
H1-18-all-fractions_k255_1550895
Phylum: Actinobacteria (70%)
10 8619 bp 71.24 2.77 95.68
H1-18-all-fractions_k255_6841981
Phylum: Actinobacteria (50%)
6 5074 bp 71.11 2.69 95.72
H1-18-all-fractions_k255_2194435
Domain: Bacteria (87.5%)
8 9045 bp 69.61 3.28 95.75
H1-18-all-fractions_k255_5256177
Class: Actinobacteria (100%)
3 3067 bp 71.24 2.98 95.76
H1-18-all-fractions_k255_3624594
Domain: Bacteria (56.25%)
16 15853 bp 71.09 2.36 95.85
H1-18-all-fractions_k255_5811148
Phylum: Actinobacteria (60%)
5 10624 bp 68.89 2.22 95.87
H1-18-all-fractions_k255_5589951
Phylum: Actinobacteria (50%)
8 8569 bp 72.24 2.66 95.89
H1-18-all-fractions_k255_1173276
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (56.25%)
16 10997 bp 70.45 2.84 95.94
H1-18-all-fractions_k255_1016050
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (66.67%)
24 25056 bp 71.14 2.56 95.97
H1-18-all-fractions_k255_3298483
Phylum: Actinobacteria (60%)
15 15145 bp 69.81 2.32 95.99
H1-18-all-fractions_k255_5529200
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (54.55%)
22 22312 bp 70.32 3.18 96.00
H1-18-all-fractions_k255_6182071
Domain: Bacteria (100%)
7 5677 bp 68.80 1.43 96.02
H1-18-all-fractions_k255_4589378
Phylum: Actinobacteria (71.43%)
7 7350 bp 68.87 2.51 96.12
H1-18-all-fractions_k255_5958208
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (60.61%)
33 31387 bp 69.75 2.50 96.19
H1-18-all-fractions_k255_6926934
Phylum: Actinobacteria (80%)
10 14820 bp 69.01 2.75 96.19
H1-18-all-fractions_k255_4042254
Class: Actinobacteria (57.14%)
7 5127 bp 70.26 2.69 96.20
H1-18-all-fractions_k255_2947656
Domain: Bacteria (66.67%)
3 2571 bp 69.70 2.63 96.38
Displaying items 101-150 of 230 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.