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H1-18-all-fractions_k255_2393947

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Displaying items 1-30 of 88 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_2393947_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1261)
DNA (1260bp) protein (420aa)
Aaa ATPase central domain-containing protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WKC6_9SPHN
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30180.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
aaa ATPase central domain-containing protein
H1-18-all-fractions_k255_2393947_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1522..2568)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003688844
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:ACG78220.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
H1-18-all-fractions_k255_2393947_3
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2608..2958)
DNA (351bp) protein (117aa)
peptide transporter n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B558BB
amino acid/peptide transporter
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
H1-18-all-fractions_k255_2393947_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3106..3621)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DHM3_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU76960.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
H1-18-all-fractions_k255_2393947_5
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3740..5632)
DNA (1893bp) protein (631aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI00031FD070
vanadium-dependent bromoperoxidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
H1-18-all-fractions_k255_2393947_6
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5881..7629
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K8P5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB33059.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
H1-18-all-fractions_k255_2393947_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7752..8141)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMQ4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67843.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
H1-18-all-fractions_k255_2393947_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8297..8800)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GF97_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02431.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
H1-18-all-fractions_k255_2393947_9
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(8805..9392)
DNA (588bp) protein (196aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2T877_9PROT
Ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:KIY10771.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
ubiquinone biosynthesis protein UbiB
H1-18-all-fractions_k255_2393947_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9356..9844)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S260_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48569.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-18-all-fractions_k255_2393947_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9948..11291)
DNA (1344bp) protein (448aa)
peptidase S41 n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488FE5
carboxyl-terminal protease
Carboxyl-terminal protease {ECO:0000313|EMBL:AGH48568.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-18-all-fractions_k255_2393947_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11465..12595)
DNA (1131bp) protein (377aa)
peptidase M23 n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488FE4
Uncharacterized protein {ECO:0000313|EMBL:AHE56618.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
peptidase M23B
H1-18-all-fractions_k255_2393947_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12599..13021)
DNA (423bp) protein (141aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RLMH_SPHWW
50S rRNA methyltransferase
H1-18-all-fractions_k255_2393947_14
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13112..13507)
DNA (396bp) protein (132aa)
ribosome-associated protein IOJAP n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB0DB
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
iojap family protein
H1-18-all-fractions_k255_2393947_15
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13517..14158)
DNA (642bp) protein (214aa)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVM3_SPHAL
nadD; nicotinic acid mononucleotide adenylyltransferase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
H1-18-all-fractions_k255_2393947_16
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14222..14911
DNA (690bp) protein (230aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIQ6_BRESC
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADL01389.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
H1-18-all-fractions_k255_2393947_17
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14864..16495)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631034
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL01388.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
H1-18-all-fractions_k255_2393947_18
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16843..18252)
DNA (1410bp) protein (470aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2J5_SPHWW
DEAD/DEAH box helicase {ECO:0000313|EMBL:KKC26383.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
DEAD/DEAH box helicase
H1-18-all-fractions_k255_2393947_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18339..18767)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S829_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH51093.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-18-all-fractions_k255_2393947_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18931..19725
DNA (795bp) protein (265aa)
Multidrug transporter n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G6H8_9SPHN
Multidrug transporter {ECO:0000313|EMBL:EZP71319.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
SapC-like protein
H1-18-all-fractions_k255_2393947_21
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19779..20126)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381870C
XRE family transcriptional regulator {ECO:0000313|EMBL:KHK93564.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
H1-18-all-fractions_k255_2393947_22
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20217..20840
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003785AFB
Putative cytochrome b561 {ECO:0000313|EMBL:GAO37983.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
cytochrome B561
H1-18-all-fractions_k255_2393947_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21081..21938)
DNA (858bp) protein (286aa)
N-formylglutamate amidohydrolase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5R9_9SPHN
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:AGH51096.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H1-18-all-fractions_k255_2393947_24
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

22096..22473
DNA (378bp) protein (126aa)
response regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A048
Response regulator {ECO:0000313|EMBL:KIY12874.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
response regulator receiver protein
H1-18-all-fractions_k255_2393947_25
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22844..25423
DNA (2580bp) protein (860aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q470S1_CUPPJ
hypothetical protein
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG19225.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
H1-18-all-fractions_k255_2393947_26
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25423..27267
DNA (1845bp) protein (615aa)
Choline dehydrogenase (EC:1.1.99.1)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H7D8_9RHIZ
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:KHD20265.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
H1-18-all-fractions_k255_2393947_27
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27264..28445
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VHS3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KJS04340.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
H1-18-all-fractions_k255_2393947_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(28904..30013)
DNA (1110bp) protein (370aa)
Glr2547 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHI8_GLOVI id=5225893 bin=16ft_combo_ws3_JS1 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
interphotoreceptor retinoid-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
H1-18-all-fractions_k255_2393947_29
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30155..31615)
DNA (1461bp) protein (487aa)
Putative iron-dependent peroxidase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GXA6_9SPHN
Putative iron-dependent peroxidase {ECO:0000313|EMBL:EJL35105.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
peroxidase
H1-18-all-fractions_k255_2393947_30
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31627..32904)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3APA4_9SPHN
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32426.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
Displaying items 1-30 of 88 in total

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