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H1-18-all-fractions_k255_1870860

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_1870860_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


44..412
DNA (369bp) protein (123aa)
50S ribosomal protein L24 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKY9_THEM7
50S ribosomal protein L24
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


409..993
DNA (585bp) protein (195aa)
50S ribosomal protein L5 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEV7_CONWI
50S ribosomal protein L5
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


993..1178
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PU70_KRIFD
30S ribosomal protein S14
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


1188..1583
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A364_THECD
30S ribosomal protein S8
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


1605..2138
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Patulibacter medicamentivorans RepID=H0E8Q5_9ACTN
50S ribosomal protein L6
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


2131..2487
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Lewinella cohaerens RepID=UPI00036DA00F
rplR; 50S ribosomal protein L18
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_7
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


2487..3344
DNA (858bp) protein (286aa)
30S ribosomal protein S5 n=1 Tax=Patulibacter americanus RepID=UPI0003B34104
30S ribosomal protein S5
Tax=RBG_16_Actinobacteria_64_13_curated
H1-18-all-fractions_k255_1870860_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


3344..3523
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Caloramator australicus RC3 RepID=I7KTX8_9CLOT
50S ribosomal protein L30
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


3523..4167
DNA (645bp) protein (215aa)
50S ribosomal protein L15 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR4_CONWI
50S ribosomal protein L15
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


4168..5427
DNA (1260bp) protein (420aa)
Protein translocase subunit SecY n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR5_CONWI
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-18-all-fractions_k255_1870860_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5579..6163
DNA (585bp) protein (195aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Adenylate kinase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZI9_9PROT
adk; adenylate kinase
H1-18-all-fractions_k255_1870860_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6160..6924
DNA (765bp) protein (255aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU51_RUBXD
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6992..7216
DNA (225bp) protein (75aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=1245004 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
translation initiation factor 1
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_14
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7222..7335
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2W0_MAHA5
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
H1-18-all-fractions_k255_1870860_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


7342..7719
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYC3_9FIRM
30S ribosomal protein S13
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


7772..8128
DNA (357bp) protein (119aa)
30S ribosomal protein S11 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS0_CONWI
30S ribosomal protein S11
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


8128..8748
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS74_KYRT2
30S ribosomal protein S4
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_1870860_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8782..9759
DNA (978bp) protein (326aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS1_CONWI
DNA-directed RNA polymerase subunit alpha
H1-18-all-fractions_k255_1870860_19
GWC2_SYX_53_9_curated, Bacteria

Not on your lists


9768..10130
DNA (363bp) protein (121aa)
50S ribosomal protein L17 n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4L5B7_9DELT
rplQ; 50S ribosomal subunit protein L17
Tax=GWC2_SYX_53_9_curated
H1-18-all-fractions_k255_1870860_20
R_OD1_Kaiserbacteria_54_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10137..10631)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XX53_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_13_curated
H1-18-all-fractions_k255_1870860_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10710..11423
DNA (714bp) protein (238aa)
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
tRNA pseudouridine synthase A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS3_CONWI
H1-18-all-fractions_k255_1870860_22
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11440..13590)
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000380F2E5
glycoside hydrolase family protein
Tax=RBG_16_Armatimonadetes_58_9_curated
H1-18-all-fractions_k255_1870860_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13629..14264
DNA (636bp) protein (212aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATN9_RUBXD
HAD family hydrolase
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_1870860_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14251..16263
DNA (2013bp) protein (671aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS5_CONWI
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_1870860_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(16267..17451)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000379BEA4
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_1870860_26
unknown

Not on your lists

17596..17916
DNA (321bp) protein (107aa)

This feature has no annotations

H1-18-all-fractions_k255_1870860_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17913..18599)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8I3_CONWI
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB50947.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-18-all-fractions_k255_1870860_28
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18650..19591)
DNA (942bp) protein (314aa)
aspartate protease n=1 Tax=Lactococcus lactis RepID=UPI00034BDF5B
Uncharacterized protein {ECO:0000313|EMBL:CDG05847.1}; TaxID=1137134 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. lactis A12.;"
yuaE; hypothetical protein
H1-18-all-fractions_k255_1870860_29
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19909..20880
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI00030BC879
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_1870860_30
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20877..21887)
DNA (1011bp) protein (337aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14623423 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
AMP-dependent synthetase and ligase
Tax=CSP1_8_Deltaproteobacteria
Displaying 30 items

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