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H1-18-all-fractions_k255_3750102

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_3750102_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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260..1642
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E557_9ACTN
UDP-N-acetylmuramyl tripeptide synthetase
H1-18-all-fractions_k255_3750102_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1663..2874
DNA (1212bp) protein (404aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E558_9ACTN
UDP-N-acetylmuramoyl-alanyl-D-glutamate--2,6-diaminopimelate ligase
H1-18-all-fractions_k255_3750102_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2871..3878
DNA (1008bp) protein (336aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2C4_CONWI
H1-18-all-fractions_k255_3750102_4
unknown

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3875..4348
DNA (474bp) protein (158aa)

This feature has no annotations

H1-18-all-fractions_k255_3750102_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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4474..5745
DNA (1272bp) protein (424aa)
murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=MURD_ACIC5
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
H1-18-all-fractions_k255_3750102_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5789..7051
DNA (1263bp) protein (421aa)
Cell division protein FtsW n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2C2_CONWI
cell division protein FtsW
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7002..7967
DNA (966bp) protein (322aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2C1_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8002..9126
DNA (1125bp) protein (375aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RLJ5_DEIPM
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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9123..10001
DNA (879bp) protein (293aa)
UDP-N-acetylenolpyruvoylglucosamine reductase 2 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=MURB2_SYMTH
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_3750102_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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10063..10881
DNA (819bp) protein (273aa)
Polypeptide-transport-associated domain protein FtsQ-type n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9Y4_THEBD
polypeptide-transport-associated domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10993..12060
DNA (1068bp) protein (356aa)
cell division protein FtsZ n=1 Tax=Patulibacter americanus RepID=UPI0003B6E3A7
cell division protein FtsZ
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_3750102_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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12270..13322
DNA (1053bp) protein (351aa)
glycine cleavage system protein T n=1 Tax=Patulibacter americanus RepID=UPI0003B54B7F
gcvT; glycine cleavage system aminomethyltransferase T
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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13323..13718
DNA (396bp) protein (132aa)
Glycine cleavage system H protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E911_9ACTN
glycine cleavage system protein H
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_3750102_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13715..15067
DNA (1353bp) protein (451aa)
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K8_CONWI
Tax=RBG_16_Actinobacteria_67_10_curated
H1-18-all-fractions_k255_3750102_15
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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15064..16566
DNA (1503bp) protein (501aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH49_MOOTA
Tax=RBG_16_Armatimonadetes_67_12_curated
H1-18-all-fractions_k255_3750102_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16487..17548)
DNA (1062bp) protein (354aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1J9_CONWI
radical SAM enzyme, Cfr family
H1-18-all-fractions_k255_3750102_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

17573..18556
DNA (984bp) protein (328aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase {ECO:0000313|EMBL:ACZ39765.1}; EC=4.1.2.5 {ECO:0000313|EMBL:ACZ39765.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Threonine aldolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7B9_SPHTD
H1-18-all-fractions_k255_3750102_18
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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18543..19877
DNA (1335bp) protein (445aa)
Beta-lactamase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T9I5_MICAI
Beta-lactamase {ECO:0000313|EMBL:EWT05122.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
beta-lactamase
H1-18-all-fractions_k255_3750102_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(19900..22470)
DNA (2571bp) protein (857aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G9_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(22470..23234)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036EC621
putative ABC transporter ATP-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(23281..24321)
DNA (1041bp) protein (347aa)
YfkE protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WQV1_9BACI
calcium/proton exchanger
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24456..24863
DNA (408bp) protein (136aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24790..26028)
DNA (1239bp) protein (413aa)
Major facilitator superfamily MFS_1 n=1 Tax=Frankia sp. CN3 RepID=G6HNH6_9ACTO
Permease, MFS-type
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26169..27020)
DNA (852bp) protein (284aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Patulibacter medicamentivorans RepID=H0E227_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

27040..28302
DNA (1263bp) protein (421aa)
Glutamate--tRNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI5_9BACT
glutamyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_68_12_curated
H1-18-all-fractions_k255_3750102_26
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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28536..28925
DNA (390bp) protein (130aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2J4_CATAD
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU69836.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H1-18-all-fractions_k255_3750102_27
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28922..29791)
DNA (870bp) protein (290aa)
Ribonuclease BN n=1 Tax=Pseudomonas sp. CF161 RepID=S6KQH1_9PSED
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDF83079.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
H1-18-all-fractions_k255_3750102_28
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(29833..30669)
DNA (837bp) protein (279aa)
Lipoprotein n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2ND44_9ACTO
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEN11796.1}; Flags: Precursor;; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
H1-18-all-fractions_k255_3750102_29
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(31007..32608)
DNA (1602bp) protein (534aa)
Probable multidrug resistance transporter, MFS family protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0S796_RHOSR
major facilitator superfamily multidrug resistance protein
Probable multidrug resistance transporter, MFS family protein {ECO:0000313|EMBL:ABG96590.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
H1-18-all-fractions_k255_3750102_30
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32719..34086
DNA (1368bp) protein (456aa)
aldehyde dehydrogenase (EC:1.2.1.-)
succinate-semialdehyde dehdyrogenase n=1 Tax=Patulibacter americanus RepID=UPI0003B58A2C
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KGI70488.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
Displaying items 1-30 of 50 in total

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