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H1-18-all-fractions_k255_4301618

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4301618_1
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..157)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003652829
Wenxma_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70155.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
transposase
H1-18-all-fractions_k255_4301618_2
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

307..444
DNA (138bp) protein (46aa)
Beta-lactamase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G1Q4_9PSEU
hypothetical protein
Beta-lactamase {ECO:0000313|EMBL:EOD65417.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
H1-18-all-fractions_k255_4301618_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

441..1205
DNA (765bp) protein (255aa)
Periplasmic substrate-binding component of ABC-type dipeptide/oligopeptide transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8I757_AMYMU
dipeptide/oligopeptide ABC transporter periplasmic protein
Dipeptide/oligopeptide ABC transporter periplasmic protein {ECO:0000313|EMBL:AEK42008.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_4301618_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1607..2704)
DNA (1098bp) protein (366aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LAG6_9ACTO
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AGL16457.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
H1-18-all-fractions_k255_4301618_5
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2787..3287
DNA (501bp) protein (167aa)
MarR family transcriptional regulatory protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LDL6_9ACTO
marR; MarR family transcriptional regulatory protein
MarR family transcriptional regulatory protein {ECO:0000313|EMBL:AGL16458.1}; Transcriptional regulator, MarR family {ECO:0000313|EMBL:AGL12190.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
H1-18-all-fractions_k255_4301618_6
unknown

Not on your lists

comp(3606..3719)
DNA (114bp) protein (38aa)

This feature has no annotations

H1-18-all-fractions_k255_4301618_7
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3850..4992
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262814A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI05096.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
H1-18-all-fractions_k255_4301618_8
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5163..5810)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003637E11
Uncharacterized protein {ECO:0000313|EMBL:EMF01786.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
hypothetical membrane protein
H1-18-all-fractions_k255_4301618_9
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6159..7892
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035C4BDD
Lysyl-tRNA synthetase {ECO:0000313|EMBL:EOD68054.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
lysyl-tRNA synthetase
H1-18-all-fractions_k255_4301618_10
unknown

Not on your lists

8035..8160
DNA (126bp) protein (42aa)

This feature has no annotations

H1-18-all-fractions_k255_4301618_11
unknown

Not on your lists

8327..8635
DNA (309bp) protein (103aa)

This feature has no annotations

H1-18-all-fractions_k255_4301618_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9650..9928)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000379E3DF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97604.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_4301618_13
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10007..10759)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037C2A78
Uncharacterized protein {ECO:0000313|EMBL:EME51749.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
hypothetical protein
H1-18-all-fractions_k255_4301618_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10756..11817)
DNA (1062bp) protein (354aa)
integrase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026288E1
Uncharacterized protein {ECO:0000313|EMBL:CEL13514.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
integrase family protein
H1-18-all-fractions_k255_4301618_15
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12537..13094)
DNA (558bp) protein (186aa)
integrase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A0FA
Integrase {ECO:0000313|EMBL:KFZ77020.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
hypothetical protein
H1-18-all-fractions_k255_4301618_16
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13538..14038)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037776A4
Uncharacterized protein {ECO:0000313|EMBL:KFZ77021.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
hypothetical protein
H1-18-all-fractions_k255_4301618_17
unknown

Not on your lists

comp(14198..14521)
DNA (324bp) protein (108aa)

This feature has no annotations

H1-18-all-fractions_k255_4301618_18
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15485..18364)
DNA (2880bp) protein (960aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035ED7A0
Uncharacterized protein {ECO:0000313|EMBL:KJK50389.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
SARP family transcriptional regulator
H1-18-all-fractions_k255_4301618_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19284..21884
DNA (2601bp) protein (867aa)
Uncharacterized protein n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S4AIB1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI01097.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_4301618_20
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21896..22060)
DNA (165bp) protein (55aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VGP0_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL08248.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
AraC family transcriptional regulator
H1-18-all-fractions_k255_4301618_21
unknown

Not on your lists

comp(22787..23167)
DNA (381bp) protein (127aa)

This feature has no annotations

H1-18-all-fractions_k255_4301618_22
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23496..24866)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00038289E0
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCH79653.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
major facilitator superfamily protein
H1-18-all-fractions_k255_4301618_23
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24863..25483)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036AE20C
Predicted protein {ECO:0000313|EMBL:EFL08497.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
PadR family transcriptional regulator
H1-18-all-fractions_k255_4301618_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25453..26982)
DNA (1530bp) protein (510aa)
Family 3 adenylate cyclase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QR19_9BRAD
transcriptional regulator domain-containing protein
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:AHG92686.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H1-18-all-fractions_k255_4301618_25
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27045..27284
DNA (240bp) protein (80aa)
NAD-dependent epimerase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262810C
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB32096.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
H1-18-all-fractions_k255_4301618_26
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27297..27665
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B6D2_RHOOB
hypothetical protein
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:ETK35591.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
H1-18-all-fractions_k255_4301618_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(27854..28777)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PDS7_9ACTO
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50647.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-18-all-fractions_k255_4301618_28
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28785..29729)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N6X8_9ACTO
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB75235.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
H1-18-all-fractions_k255_4301618_29
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29876..30490)
DNA (615bp) protein (205aa)
Integral membrane protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FVX6_AMYMS
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AEK43913.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_4301618_30
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30487..30633)
DNA (147bp) protein (49aa)
membrane protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036AF100
Membrane protein {ECO:0000313|EMBL:AIH39726.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
hypothetical protein
Displaying items 1-30 of 86 in total

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