ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %

Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3

Displaying items 951-1000 of 1214 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-16-all-fractions_k255_5135357 Species: R_Gemmatimonadetes_71_11 (50%)	2	1786 bp	67.97	0.34	99.78
H2-16-all-fractions_k255_4590631 Species: R_Gemmatimonadetes_71_11 (50%)	2	1636 bp	69.80	0.55	98.11
H2-16-all-fractions_k255_9138697 Species: Knoellia sinensis (50%)	2	1911 bp	71.95	1.26	94.19
H2-16-all-fractions_k255_2593714 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2715 bp	70.79	0.28	95.47
H2-16-all-fractions_k255_9146106 Species: Myxococcus stipitatus (50%)	2	1628 bp	69.35	0.09	91.40
H2-16-all-fractions_k255_7117841 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1603 bp	70.31	0.56	78.23
H2-16-all-fractions_k255_9157081 Species: Conexibacter woesei (50%)	2	1830 bp	72.30	1.64	89.84
H2-16-all-fractions_k255_9161803 Species: Niastella koreensis (50%)	2	1870 bp	73.96	0.24	87.43
H2-16-all-fractions_k255_7145895 Species: Gemmatimonas aurantiaca (50%)	2	1948 bp	72.13	1.00	89.63
H2-16-all-fractions_k255_7167726 Species: Burkholderia sp. H160 (100%)	2	1509 bp	68.06	1.49	100.40
H2-16-all-fractions_k255_5187660 Species: Cystobacter violaceus (50%)	2	3027 bp	67.62	0.69	100.00
H2-16-all-fractions_k255_4653129 Species: [Oscillatoria] sp. PCC 6506 (50%)	2	2653 bp	70.03	0.17	99.96
H2-16-all-fractions_k255_7198357 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)	2	1529 bp	69.46	0.00	88.88
H2-16-all-fractions_k255_851617 Species: Streptomyces rimosus (50%)	2	1762 bp	71.23	0.17	60.10
H2-16-all-fractions_k255_2656532 Species: Hyalangium minutum (50%)	2	2364 bp	67.85	0.76	68.78
H2-16-all-fractions_k255_7208099 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1611 bp	68.53	0.37	97.39
H2-16-all-fractions_k255_2662268 Species: GWD2_Desulfuromonadales_61_12_curated (50%)	2	2088 bp	69.64	0.43	99.57
H2-16-all-fractions_k255_5199621 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2069 bp	69.84	0.65	93.96
H2-16-all-fractions_k255_7219646 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1861 bp	71.09	0.08	78.67
H2-16-all-fractions_k255_9195899 Species: CSP1_6_Rokubacteria (50%)	2	1822 bp	70.91	0.74	96.32
H2-16-all-fractions_k255_861277 Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)	2	1817 bp	68.30	1.07	93.29
H2-16-all-fractions_k255_2667086 Species: RBG_19FT_COMBO_Zixibacteria_42_43_curated (50%)	2	1966 bp	69.18	0.15	94.15
H2-16-all-fractions_k255_2673808 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	3246 bp	69.56	0.55	98.80
H2-16-all-fractions_k255_5224489 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	3328 bp	69.05	0.81	93.84
H2-16-all-fractions_k255_5224721 Species: RLO_Rhodospirillales_67_15 (50%)	2	1909 bp	71.29	0.08	94.45
H2-16-all-fractions_k255_893738 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1782 bp	67.45	0.00	88.55
H2-16-all-fractions_k255_4694960 Species: Leptospirillum sp. Group II 'C75' (50%)	2	2064 bp	66.91	2.25	86.05
H2-16-all-fractions_k255_5268016 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1522 bp	70.57	0.49	100.13
H2-16-all-fractions_k255_4723772 Species: Candidatus Entotheonella sp. TSY1 (50%)	2	1515 bp	75.45	0.99	100.20
H2-16-all-fractions_k255_5285548 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	2913 bp	68.42	0.57	100.00
H2-16-all-fractions_k255_5287027 Species: RBG_16_Actinobacteria_67_10_curated (50%)	2	1878 bp	75.03	0.24	102.40
H2-16-all-fractions_k255_953428 Species: R_Gemmatimonadetes_71_11 (50%)	2	2080 bp	68.99	0.22	98.51
H2-16-all-fractions_k255_2717348 Species: GWC2_Gemmatimonadetes_71_10_curated (100%)	2	1500 bp	70.73	0.30	99.40
H2-16-all-fractions_k255_7298745 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	2650 bp	71.36	0.51	98.94
H2-16-all-fractions_k255_6605679 Species: Pyrinomonas methylaliphatogenes (50%)	2	1808 bp	69.47	0.91	80.48
H2-16-all-fractions_k255_5313283 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2617 bp	69.81	0.23	99.96
H2-16-all-fractions_k255_1021996 Species: Myxococcus fulvus (50%)	2	2726 bp	70.58	0.77	100.04
H2-16-all-fractions_k255_5337631 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2008 bp	71.41	0.15	100.10
H2-16-all-fractions_k255_7353070 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1765 bp	69.46	0.76	99.77
H2-16-all-fractions_k255_5343180 Species: RBG_16_RIF_CHLX_70_13_curated (50%)	2	1522 bp	70.24	0.89	83.77
H2-16-all-fractions_k255_6348022 Species: Conexibacter woesei (50%)	2	1905 bp	67.82	1.10	95.28
H2-16-all-fractions_k255_6662433 Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)	2	1586 bp	68.22	0.66	96.47
H2-16-all-fractions_k255_1035384 Species: RBG_19FT_COMBO_Chloroflexi_50_10_curated (50%)	2	1884 bp	65.23	0.64	74.84
H2-16-all-fractions_k255_5363857 Species: BJP_IG2069_Anaerolineales_43_63 (50%)	2	1685 bp	68.66	0.00	97.03
H2-16-all-fractions_k255_7378921 Species: Nocardiopsis dassonvillei (50%)	2	1915 bp	66.42	0.55	58.59
H2-16-all-fractions_k255_5386932 Species: Gemmatimonas aurantiaca (50%)	2	2874 bp	69.14	0.37	90.92
H2-16-all-fractions_k255_7389884 Species: Phenylobacterium zucineum (50%)	2	2944 bp	68.95	0.56	98.23
H2-16-all-fractions_k255_8268992 Species: Sphingobium japonicum (50%)	2	1930 bp	70.21	0.16	100.10
H2-16-all-fractions_k255_1059008 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1866 bp	70.15	0.72	99.68
H2-16-all-fractions_k255_7392167 Species: Acidocella sp. MX-AZ02 (50%)	2	1548 bp	70.28	0.00	99.42

Displaying items 951-1000 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-16-all-fractions_metab_114) and add all its contigs / scaffolds to the organism you choose below

----- OR --------

Other organism

H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

Processing

Terms of Service

Search Help