ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %

Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3

Displaying items 1001-1050 of 1214 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-16-all-fractions_k255_5393971 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1812 bp	71.19	1.08	99.83
H2-16-all-fractions_k255_7410079 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1586 bp	72.82	0.57	100.25
H2-16-all-fractions_k255_5397539 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1714 bp	69.66	0.35	99.77
H2-16-all-fractions_k255_2854757 Species: RLO_Gemmatimonadetes_68_9 (100%)	2	2062 bp	72.55	0.07	99.52
H2-16-all-fractions_k255_5404783 Species: RLO_Gemmatimonadetes_68_9 (100%)	2	2716 bp	74.52	0.28	100.07
H2-16-all-fractions_k255_2856396 Species: Pseudonocardia dioxanivorans (50%)	2	1620 bp	66.05	0.28	58.15
H2-16-all-fractions_k255_2859841 Species: Kitasatospora setae (50%)	2	1839 bp	72.16	0.16	100.00
H2-16-all-fractions_k255_7435817 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1675 bp	73.55	0.00	94.93
H2-16-all-fractions_k255_1099340 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1799 bp	69.04	1.17	79.71
H2-16-all-fractions_k255_2863079 Species: uncultured bacterium lac127 (50%)	2	3136 bp	69.99	0.67	98.53
H2-16-all-fractions_k255_7441947 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1715 bp	67.93	0.52	100.06
H2-16-all-fractions_k255_7445236 Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)	2	2277 bp	69.04	0.13	99.74
H2-16-all-fractions_k255_2883129 Species: Robiginitalea biformata (50%)	2	1701 bp	72.19	0.62	98.77
H2-16-all-fractions_k255_1121458 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1569 bp	69.02	0.76	91.40
H2-16-all-fractions_k255_7469335 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1729 bp	69.29	0.26	84.50
H2-16-all-fractions_k255_1136347 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	3639 bp	71.61	0.54	97.53
H2-16-all-fractions_k255_2912448 Species: RBG_16_Acidobacteria_68_9_curated (50%)	2	2458 bp	67.49	0.43	84.46
H2-16-all-fractions_k255_7520592 Species: Singulisphaera acidiphila (50%)	2	1694 bp	67.59	1.15	95.45
H2-16-all-fractions_k255_5477135 Species: RBG_19FT_COMBO_Nitrospirae_58_9_curated (50%)	2	1537 bp	70.53	1.66	91.35
H2-16-all-fractions_k255_7527893 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1511 bp	74.32	0.40	96.89
H2-16-all-fractions_k255_1162128 Species: Kribbella flavida (50%)	2	1721 bp	71.88	0.26	81.06
H2-16-all-fractions_k255_2929266 Species: Rhodopirellula europaea (50%)	2	1679 bp	69.09	0.45	96.49
H2-16-all-fractions_k255_1165708 Species: Pedosphaera parvula (50%)	2	1734 bp	69.95	0.26	96.71
H2-16-all-fractions_k255_2952191 Species: Conexibacter woesei (50%)	2	1532 bp	71.48	0.98	94.58
H2-16-all-fractions_k255_5480979 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1540 bp	70.32	0.78	97.60
H2-16-all-fractions_k255_2956229 Species: Streptomyces sp. MK498-98F14 (100%)	2	1519 bp	72.68	0.79	94.60
H2-16-all-fractions_k255_2978345 Species: R_Elusimicrobia_57_9 (50%)	2	1947 bp	69.90	0.23	100.15
H2-16-all-fractions_k255_1222928 Species: Desulfotomaculum gibsoniae (50%)	2	2527 bp	68.10	0.47	95.69
H2-16-all-fractions_k255_7583224 Species: Rubrobacter xylanophilus (50%)	2	2823 bp	68.86	0.16	81.40
H2-16-all-fractions_k255_1233312 Species: Rhodococcus sp. PML026 (50%)	2	1967 bp	69.24	0.84	86.17
H2-16-all-fractions_k255_3048471 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	2007 bp	70.45	0.07	95.22
H2-16-all-fractions_k255_5531919 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1567 bp	66.11	0.86	98.79
H2-16-all-fractions_k255_3058890 Species: GWC2_Nitrospirae_56_14_curated (50%)	2	1654 bp	73.22	0.63	99.76
H2-16-all-fractions_k255_1245781 Species: R_Gemmatimonadetes_71_11 (50%)	2	2253 bp	74.08	0.27	101.73
H2-16-all-fractions_k255_3094295 Species: Streptomyces sp. NRRL S-444 (50%)	2	1883 bp	70.15	0.24	94.00
H2-16-all-fractions_k255_7621707 Species: Nitrosococcus halophilus (50%)	2	2837 bp	69.62	0.37	98.24
H2-16-all-fractions_k255_1246096 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	3179 bp	71.28	0.66	99.56
H2-16-all-fractions_k255_5564538 Species: Haliangium ochraceum (50%)	2	1569 bp	72.21	0.10	84.70
H2-16-all-fractions_k255_7625538 Species: Pyrinomonas methylaliphatogenes (50%)	2	2103 bp	69.00	0.50	85.73
H2-16-all-fractions_k255_1275525 Species: RBG_16_Chloroflexi_68_14_curated (50%)	2	1628 bp	68.86	0.46	81.45
H2-16-all-fractions_k255_1276422 Species: R_Gemmatimonadetes_71_11 (50%)	2	1590 bp	66.92	0.09	100.19
H2-16-all-fractions_k255_3136537 Species: R_Betaproteobacteria_67_26 (50%)	2	1742 bp	70.61	0.09	98.68
H2-16-all-fractions_k255_7669219 Species: R_Gammaproteobacteria_60_43 (50%)	2	3307 bp	67.74	0.64	95.80
H2-16-all-fractions_k255_3138922 Species: Caldilinea aerophila (50%)	2	2291 bp	64.56	0.20	89.83
H2-16-all-fractions_k255_3156153 Species: Candidatus Competibacter denitrificans (50%)	2	2561 bp	69.58	0.94	87.04
H2-16-all-fractions_k255_5614603 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1586 bp	69.23	0.47	99.68
H2-16-all-fractions_k255_7674883 Species: Skermanella aerolata (50%)	2	2184 bp	65.52	1.24	90.80
H2-16-all-fractions_k255_1325762 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)	2	1859 bp	69.39	0.00	95.70
H2-16-all-fractions_k255_5621507 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1639 bp	68.03	0.64	86.21
H2-16-all-fractions_k255_5622273 Species: Gemmatimonas aurantiaca (50%)	2	2190 bp	71.10	0.27	98.49

Displaying items 1001-1050 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-16-all-fractions_metab_114) and add all its contigs / scaffolds to the organism you choose below

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Other organism

H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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