ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %

Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3

Displaying items 1051-1100 of 1214 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-16-all-fractions_k255_7704886 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	3357 bp	69.62	0.58	97.94
H2-16-all-fractions_k255_3174844 Species: Rubinisphaera brasiliensis (50%)	2	2092 bp	69.93	2.15	97.51
H2-16-all-fractions_k255_3184035 Species: Catenulispora acidiphila (50%)	2	1865 bp	67.51	4.66	50.35
H2-16-all-fractions_k255_7727259 Species: Nocardioides luteus (50%)	2	1744 bp	70.47	0.60	91.69
H2-16-all-fractions_k255_1371892 Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)	2	1609 bp	70.35	0.19	98.63
H2-16-all-fractions_k255_1383448 Species: RBG_16_Acidobacteria_64_8_curated (50%)	2	2066 bp	69.46	12.85	97.29
H2-16-all-fractions_k255_5655054 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2240 bp	67.19	0.60	88.39
H2-16-all-fractions_k255_1397167 Species: Micromonospora carbonacea (50%)	2	1607 bp	69.26	0.37	98.38
H2-16-all-fractions_k255_7789716 Species: RLO_Rhodospirillales_67_15 (50%)	2	3071 bp	73.43	0.44	97.10
H2-16-all-fractions_k255_5717779 Species: Nostoc punctiforme (50%)	2	2077 bp	70.25	0.29	100.10
H2-16-all-fractions_k255_7802452 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1549 bp	69.40	0.10	99.94
H2-16-all-fractions_k255_3232819 Species: Asaia platycodi (50%)	2	1849 bp	69.23	0.57	60.84
H2-16-all-fractions_k255_7803664 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1569 bp	70.62	0.96	95.03
H2-16-all-fractions_k255_1425316 Species: Methylobacterium sp. 4-46 (50%)	2	2176 bp	68.98	0.07	98.99
H2-16-all-fractions_k255_7807461 Species: RIFOXYD12_FULL_Ignavibacteria_36_8_curated (50%)	2	2266 bp	70.43	0.26	84.20
H2-16-all-fractions_k255_5764857 Species: Gemmatimonas aurantiaca (50%)	2	1981 bp	72.94	0.61	98.28
H2-16-all-fractions_k255_5768714 Species: R_NC10_66_22 (50%)	2	1795 bp	70.86	0.33	98.94
H2-16-all-fractions_k255_7811034 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)	2	3130 bp	71.88	0.67	97.09
H2-16-all-fractions_k255_1443193 Species: Stigmatella aurantiaca (50%)	2	3955 bp	70.90	0.30	98.15
H2-16-all-fractions_k255_1444446 Species: R_Acidobacteria_65_29 (50%)	2	2177 bp	72.85	0.28	99.08
H2-16-all-fractions_k255_3258681 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	2606 bp	70.11	0.12	98.89
H2-16-all-fractions_k255_5784236 Species: Desulfovibrio fructosivorans (50%)	2	1988 bp	72.99	0.15	74.09
H2-16-all-fractions_k255_7825181 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1946 bp	66.08	1.23	85.25
H2-16-all-fractions_k255_1455706 Species: GWC2_Gemmatimonadetes_71_10_curated (100%)	2	2275 bp	70.99	0.33	96.00
H2-16-all-fractions_k255_7855359 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2395 bp	69.85	0.50	100.08
H2-16-all-fractions_k255_5786288 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1512 bp	70.50	0.79	91.47
H2-16-all-fractions_k255_1468723 Species: Patulibacter medicamentivorans (50%)	2	1710 bp	70.58	0.79	88.77
H2-16-all-fractions_k255_5834893 Species: Streptomyces sp. WM6386 (50%)	2	1546 bp	72.51	0.97	99.35
H2-16-all-fractions_k255_7876829 Species: Singulisphaera acidiphila (100%)	2	1758 bp	68.20	1.54	93.34
H2-16-all-fractions_k255_7884367 Species: GWA2_Bacteroidetes_40_15_curated (50%)	2	2053 bp	69.90	0.88	90.01
H2-16-all-fractions_k255_7912933 Species: Singulisphaera acidiphila (100%)	2	2174 bp	64.63	0.62	100.05
H2-16-all-fractions_k255_1528755 Species: Rhodanobacter thiooxydans (50%)	2	2496 bp	69.15	0.12	99.16
H2-16-all-fractions_k255_3402310 Species: Candidatus Solibacter usitatus (50%)	2	1560 bp	66.54	0.38	95.19
H2-16-all-fractions_k255_5883284 Species: Gemmatimonas aurantiaca (50%)	2	2888 bp	70.60	0.99	97.02
H2-16-all-fractions_k255_3411576 Species: Myxococcus fulvus (50%)	2	1591 bp	71.09	0.38	100.13
H2-16-all-fractions_k255_5890147 Species: RLO_Nitrospinae_45_22 (50%)	2	1539 bp	67.06	0.19	76.61
H2-16-all-fractions_k255_5891362 Species: Acetohalobium arabaticum (50%)	2	3637 bp	68.19	0.41	94.94
H2-16-all-fractions_k255_7944550 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2429 bp	72.62	0.49	98.56
H2-16-all-fractions_k255_5893495 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2377 bp	68.11	0.19	100.08
H2-16-all-fractions_k255_1598350 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1865 bp	69.97	0.64	100.21
H2-16-all-fractions_k255_3445569 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1540 bp	70.00	0.88	100.13
H2-16-all-fractions_k255_1600497 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2855 bp	71.84	0.68	96.78
H2-16-all-fractions_k255_1604071 Species: RBG_16_RIF_CHLX_72_14_curated (100%)	2	1730 bp	72.72	0.35	72.66
H2-16-all-fractions_k255_5922153 Species: uncultured bacterium lac160 (100%)	2	1631 bp	68.06	0.64	93.26
H2-16-all-fractions_k255_1607622 Species: Conexibacter woesei (50%)	2	1613 bp	73.16	0.65	79.79
H2-16-all-fractions_k255_3459080 Species: GWA1_Bdellovibrionales_52_35_curated (50%)	2	1669 bp	68.18	0.45	80.89
H2-16-all-fractions_k255_3459787 Species: Streptosporangium roseum (50%)	2	1929 bp	70.45	0.70	95.80
H2-16-all-fractions_k255_5953420 Species: Acidobacterium capsulatum (50%)	2	2500 bp	70.00	0.72	93.12
H2-16-all-fractions_k255_3464288 Species: Streptomyces collinus (50%)	2	1652 bp	66.40	0.00	52.48
H2-16-all-fractions_k255_1629238 Species: RBG_19FT_COMBO_Nitrospirae_58_9_curated (50%)	2	1516 bp	66.75	0.20	83.91

Displaying items 1051-1100 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-16-all-fractions_metab_114) and add all its contigs / scaffolds to the organism you choose below

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Other organism

H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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