ggKbase home page
Advanced Search
Search Help

H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %
Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3
Displaying items 1101-1150 of 1214 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-16-all-fractions_k255_3478391
Species: R_Acidobacteria_65_29 (50%)
2 1892 bp 69.82 0.32 73.41
H2-16-all-fractions_k255_8044892
Species: Candidatus Solibacter usitatus (50%)
2 3262 bp 71.98 0.83 86.54
H2-16-all-fractions_k255_1643009
Species: RBG_16_Actinobacteria_67_10_curated (100%)
2 3084 bp 72.70 0.58 97.67
H2-16-all-fractions_k255_6018611
Species: R_Gemmatimonadetes_71_11 (50%)
2 1664 bp 68.75 1.80 100.06
H2-16-all-fractions_k255_3488407
Species: Rhodothermus marinus (100%)
2 1567 bp 71.28 0.00 98.02
H2-16-all-fractions_k255_1667743
Species: Mesorhizobium sp. L2C085B000 (50%)
2 1641 bp 67.40 0.46 81.90
H2-16-all-fractions_k255_3493153
Species: Scytonema tolypothrichoides (50%)
2 1714 bp 70.13 0.00 87.34
H2-16-all-fractions_k255_6044521
Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)
2 1861 bp 66.74 0.32 98.33
H2-16-all-fractions_k255_8090281
Species: Skermanella aerolata (50%)
2 1750 bp 70.63 1.80 81.43
H2-16-all-fractions_k255_8092780
Species: Streptomyces avermitilis (100%)
2 1986 bp 73.21 0.68 89.43
H2-16-all-fractions_k255_6070263
Species: GWA2_Elusimicrobia_69_24_curated (50%)
2 1599 bp 72.67 1.22 101.88
H2-16-all-fractions_k255_1686698
Species: Nocardioides sp. JS614 (50%)
2 1866 bp 71.92 0.24 99.52
H2-16-all-fractions_k255_3513854
Species: Gemmatimonas aurantiaca (50%)
2 1606 bp 74.91 0.28 100.13
H2-16-all-fractions_k255_6078282
Species: Pseudonocardia dioxanivorans (50%)
2 2540 bp 69.17 3.07 80.20
H2-16-all-fractions_k255_3532997
Species: Gemmatimonas aurantiaca (50%)
2 1527 bp 70.27 0.49 96.27
H2-16-all-fractions_k255_8140982
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 1543 bp 69.09 0.97 94.49
H2-16-all-fractions_k255_8153203
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 2010 bp 71.34 0.90 98.81
H2-16-all-fractions_k255_6187056
Species: R_Gemmatimonadetes_71_11 (50%)
2 1809 bp 69.04 0.17 100.00
H2-16-all-fractions_k255_8185778
Species: R_Gemmatimonadetes_71_11 (100%)
2 2021 bp 70.41 0.07 79.71
H2-16-all-fractions_k255_1739975
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2390 bp 72.68 1.00 99.92
H2-16-all-fractions_k255_3608943
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 1973 bp 71.52 0.61 99.44
H2-16-all-fractions_k255_3625701
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1865 bp 73.03 0.00 77.21
H2-16-all-fractions_k255_1763489
Species: Microvirga lotononidis (50%)
2 1836 bp 69.06 0.41 98.04
H2-16-all-fractions_k255_6239761
Species: Microlunatus phosphovorus (50%)
2 1555 bp 69.07 0.68 93.57
H2-16-all-fractions_k255_1764085
Species: gamma proteobacterium NOR5-3 (50%)
2 1908 bp 68.87 1.18 91.51
H2-16-all-fractions_k255_1771408
Species: GWB2_Ignavibacteria_35_6b_curated (50%)
2 1770 bp 68.14 0.68 91.86
H2-16-all-fractions_k255_6256302
Species: R_Gemmatimonadetes_71_11 (100%)
2 2347 bp 67.96 0.70 99.32
H2-16-all-fractions_k255_8240860
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 2309 bp 67.99 0.39 94.85
H2-16-all-fractions_k255_8241233
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated (50%)
2 1824 bp 68.91 0.58 99.18
H2-16-all-fractions_k255_8244152
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 2181 bp 69.05 0.96 96.15
H2-16-all-fractions_k255_1785491
Species: Acidiphilium multivorum (50%)
2 1584 bp 65.40 2.46 60.80
H2-16-all-fractions_k255_8244415
Species: Truepera radiovictrix (50%)
2 1547 bp 67.55 0.58 92.89
H2-16-all-fractions_k255_8246827
Species: Microbacterium azadirachtae (50%)
2 3094 bp 66.81 0.44 87.75
H2-16-all-fractions_k255_1824825
Species: Rhodococcus sp. MEB064 (50%)
2 1542 bp 71.66 0.29 81.71
H2-16-all-fractions_k255_6294558
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2582 bp 71.07 0.35 99.69
H2-16-all-fractions_k255_8256168
Species: R_Acidobacteria_59_13 (50%)
2 1844 bp 71.80 0.41 90.78
H2-16-all-fractions_k255_3755852
Species: Gemmatimonas aurantiaca (50%)
2 1780 bp 68.54 0.59 99.44
H2-16-all-fractions_k255_1835410
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1602 bp 68.23 0.19 96.63
H2-16-all-fractions_k255_3758224
Species: RBG_16_RIF_CHLX_72_14_curated (50%)
2 2084 bp 70.49 1.08 100.48
H2-16-all-fractions_k255_1846978
Species: marine sediment metagenome (50%)
2 1846 bp 71.18 0.00 99.78
H2-16-all-fractions_k255_6326970
Species: GWA2_Rokubacteria_70_23_curated (50%)
2 1605 bp 68.22 0.37 87.66
H2-16-all-fractions_k255_8292411
Species: Cyanothece sp. CCY0110 (50%)
2 1546 bp 71.47 0.10 99.16
H2-16-all-fractions_k255_1854090
Species: Roseiflexus castenholzii (50%)
2 1804 bp 72.56 0.08 78.16
H2-16-all-fractions_k255_6349653
Species: Methanocella arvoryzae (50%)
2 1828 bp 68.05 0.66 67.94
H2-16-all-fractions_k255_1855950
Species: Conexibacter woesei (50%)
2 1791 bp 69.35 0.92 99.33
H2-16-all-fractions_k255_1875724
Species: Mycobacterium chelonae (50%)
2 1620 bp 71.23 0.65 92.04
H2-16-all-fractions_k255_3830896
Species: RLO_Gemmatimonadetes_68_9 (100%)
2 2612 bp 68.84 0.69 100.04
H2-16-all-fractions_k255_3835174
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1622 bp 69.24 0.37 97.47
H2-16-all-fractions_k255_8328190
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1591 bp 66.69 1.04 82.97
H2-16-all-fractions_k255_3839217
Species: Streptomyces albus (50%)
2 1825 bp 72.38 1.23 99.95
Displaying items 1101-1150 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.