ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %

Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3

Displaying items 151-200 of 1214 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-16-all-fractions_k255_6924228 Species: RBG_13_Acidobacteria_68_16_curated (50%)	2	3488 bp	67.86	0.17	100.03
H2-16-all-fractions_k255_6952567 Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)	2	1520 bp	72.70	0.20	100.07
H2-16-all-fractions_k255_608508 Species: Acidiphilium cryptum (50%)	2	1515 bp	70.63	0.59	95.84
H2-16-all-fractions_k255_2466961 Species: CG_Elusi_05 (50%)	2	1888 bp	68.27	0.48	84.69
H2-16-all-fractions_k255_5011455 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1921 bp	70.38	0.31	98.85
H2-16-all-fractions_k255_8981798 Species: Streptomyces hygroscopicus (50%)	2	1517 bp	74.42	0.49	99.87
H2-16-all-fractions_k255_631810 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2545 bp	68.96	0.24	93.12
H2-16-all-fractions_k255_4457413 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2851 bp	68.68	0.11	94.70
H2-16-all-fractions_k255_8999718 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1665 bp	68.89	0.99	99.28
H2-16-all-fractions_k255_4469883 Species: Anaeromyxobacter dehalogenans (50%)	2	2493 bp	68.43	0.42	99.64
H2-16-all-fractions_k255_5022562 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2723 bp	69.85	0.77	99.82
H2-16-all-fractions_k255_5031532 Species: Stigmatella aurantiaca (50%)	2	1756 bp	71.81	0.60	100.11
H2-16-all-fractions_k255_9020100 Species: Nitrosococcus halophilus (50%)	2	2565 bp	71.62	0.47	100.12
H2-16-all-fractions_k255_669189 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	3308 bp	72.25	0.18	92.78
H2-16-all-fractions_k255_7010461 Species: Candidatus Methylomirabilis oxyfera (50%)	2	1987 bp	70.76	0.38	100.10
H2-16-all-fractions_k255_4532164 Species: Gloeobacter kilaueensis (50%)	2	1691 bp	69.43	0.44	99.17
H2-16-all-fractions_k255_5054319 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	3528 bp	67.83	0.89	99.74
H2-16-all-fractions_k255_7028928 Species: Burkholderia sp. SJ98 (50%)	2	2525 bp	69.39	0.59	81.39
H2-16-all-fractions_k255_4543138 Species: Bordetella parapertussis (50%)	2	3545 bp	66.49	0.89	86.74
H2-16-all-fractions_k255_9023984 Species: CG_Delta_07 (50%)	2	1604 bp	68.20	1.12	92.21
H2-16-all-fractions_k255_4552162	2	1554 bp	70.79	0.77	68.92
H2-16-all-fractions_k255_4560091 Species: RBG_16_RIF05_58_8_curated (50%)	2	2000 bp	73.10	0.83	99.00
H2-16-all-fractions_k255_5075431 Species: R_Gemmatimonadetes_71_11 (100%)	2	1872 bp	69.12	0.48	100.00
H2-16-all-fractions_k255_4563128 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2159 bp	69.89	0.42	98.38
H2-16-all-fractions_k255_7074260 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1725 bp	74.67	0.00	98.43
H2-16-all-fractions_k255_717542 Species: Pyrinomonas methylaliphatogenes (50%)	2	1940 bp	69.90	0.70	83.35
H2-16-all-fractions_k255_9098840 Species: RBG_16_Acidobacteria_70_10_curated (50%)	2	1607 bp	69.70	0.19	88.86
H2-16-all-fractions_k255_2566970 Species: R_Gemmatimonadetes_71_11 (50%)	2	2208 bp	69.84	0.07	84.92
H2-16-all-fractions_k255_5135357 Species: R_Gemmatimonadetes_71_11 (50%)	2	1786 bp	67.97	0.34	99.78
H2-16-all-fractions_k255_4590631 Species: R_Gemmatimonadetes_71_11 (50%)	2	1636 bp	69.80	0.55	98.11
H2-16-all-fractions_k255_9138697 Species: Knoellia sinensis (50%)	2	1911 bp	71.95	1.26	94.19
H2-16-all-fractions_k255_2593714 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2715 bp	70.79	0.28	95.47
H2-16-all-fractions_k255_9146106 Species: Myxococcus stipitatus (50%)	2	1628 bp	69.35	0.09	91.40
H2-16-all-fractions_k255_7117841 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1603 bp	70.31	0.56	78.23
H2-16-all-fractions_k255_9157081 Species: Conexibacter woesei (50%)	2	1830 bp	72.30	1.64	89.84
H2-16-all-fractions_k255_9161803 Species: Niastella koreensis (50%)	2	1870 bp	73.96	0.24	87.43
H2-16-all-fractions_k255_7145895 Species: Gemmatimonas aurantiaca (50%)	2	1948 bp	72.13	1.00	89.63
H2-16-all-fractions_k255_7167726 Species: Burkholderia sp. H160 (100%)	2	1509 bp	68.06	1.49	100.40
H2-16-all-fractions_k255_5187660 Species: Cystobacter violaceus (50%)	2	3027 bp	67.62	0.69	100.00
H2-16-all-fractions_k255_4653129 Species: [Oscillatoria] sp. PCC 6506 (50%)	2	2653 bp	70.03	0.17	99.96
H2-16-all-fractions_k255_7198357 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)	2	1529 bp	69.46	0.00	88.88
H2-16-all-fractions_k255_851617 Species: Streptomyces rimosus (50%)	2	1762 bp	71.23	0.17	60.10
H2-16-all-fractions_k255_2656532 Species: Hyalangium minutum (50%)	2	2364 bp	67.85	0.76	68.78
H2-16-all-fractions_k255_7208099 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1611 bp	68.53	0.37	97.39
H2-16-all-fractions_k255_2662268 Species: GWD2_Desulfuromonadales_61_12_curated (50%)	2	2088 bp	69.64	0.43	99.57
H2-16-all-fractions_k255_5199621 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2069 bp	69.84	0.65	93.96
H2-16-all-fractions_k255_7219646 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1861 bp	71.09	0.08	78.67
H2-16-all-fractions_k255_9195899 Species: CSP1_6_Rokubacteria (50%)	2	1822 bp	70.91	0.74	96.32
H2-16-all-fractions_k255_861277 Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)	2	1817 bp	68.30	1.07	93.29
H2-16-all-fractions_k255_2667086 Species: RBG_19FT_COMBO_Zixibacteria_42_43_curated (50%)	2	1966 bp	69.18	0.15	94.15

Displaying items 151-200 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-16-all-fractions_metab_114) and add all its contigs / scaffolds to the organism you choose below

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Other organism

H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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