ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %

Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3

Displaying items 201-250 of 1214 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-16-all-fractions_k255_2673808 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	3246 bp	69.56	0.55	98.80
H2-16-all-fractions_k255_5224489 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	3328 bp	69.05	0.81	93.84
H2-16-all-fractions_k255_5224721 Species: RLO_Rhodospirillales_67_15 (50%)	2	1909 bp	71.29	0.08	94.45
H2-16-all-fractions_k255_893738 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1782 bp	67.45	0.00	88.55
H2-16-all-fractions_k255_4694960 Species: Leptospirillum sp. Group II 'C75' (50%)	2	2064 bp	66.91	2.25	86.05
H2-16-all-fractions_k255_5268016 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1522 bp	70.57	0.49	100.13
H2-16-all-fractions_k255_4723772 Species: Candidatus Entotheonella sp. TSY1 (50%)	2	1515 bp	75.45	0.99	100.20
H2-16-all-fractions_k255_5285548 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	2913 bp	68.42	0.57	100.00
H2-16-all-fractions_k255_5287027 Species: RBG_16_Actinobacteria_67_10_curated (50%)	2	1878 bp	75.03	0.24	102.40
H2-16-all-fractions_k255_953428 Species: R_Gemmatimonadetes_71_11 (50%)	2	2080 bp	68.99	0.22	98.51
H2-16-all-fractions_k255_2717348 Species: GWC2_Gemmatimonadetes_71_10_curated (100%)	2	1500 bp	70.73	0.30	99.40
H2-16-all-fractions_k255_7298745 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	2650 bp	71.36	0.51	98.94
H2-16-all-fractions_k255_6605679 Species: Pyrinomonas methylaliphatogenes (50%)	2	1808 bp	69.47	0.91	80.48
H2-16-all-fractions_k255_5313283 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2617 bp	69.81	0.23	99.96
H2-16-all-fractions_k255_1021996 Species: Myxococcus fulvus (50%)	2	2726 bp	70.58	0.77	100.04
H2-16-all-fractions_k255_5337631 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2008 bp	71.41	0.15	100.10
H2-16-all-fractions_k255_7353070 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1765 bp	69.46	0.76	99.77
H2-16-all-fractions_k255_5343180 Species: RBG_16_RIF_CHLX_70_13_curated (50%)	2	1522 bp	70.24	0.89	83.77
H2-16-all-fractions_k255_6348022 Species: Conexibacter woesei (50%)	2	1905 bp	67.82	1.10	95.28
H2-16-all-fractions_k255_6662433 Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)	2	1586 bp	68.22	0.66	96.47
H2-16-all-fractions_k255_1035384 Species: RBG_19FT_COMBO_Chloroflexi_50_10_curated (50%)	2	1884 bp	65.23	0.64	74.84
H2-16-all-fractions_k255_5363857 Species: BJP_IG2069_Anaerolineales_43_63 (50%)	2	1685 bp	68.66	0.00	97.03
H2-16-all-fractions_k255_7378921 Species: Nocardiopsis dassonvillei (50%)	2	1915 bp	66.42	0.55	58.59
H2-16-all-fractions_k255_5386932 Species: Gemmatimonas aurantiaca (50%)	2	2874 bp	69.14	0.37	90.92
H2-16-all-fractions_k255_7389884 Species: Phenylobacterium zucineum (50%)	2	2944 bp	68.95	0.56	98.23
H2-16-all-fractions_k255_8268992 Species: Sphingobium japonicum (50%)	2	1930 bp	70.21	0.16	100.10
H2-16-all-fractions_k255_1059008 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1866 bp	70.15	0.72	99.68
H2-16-all-fractions_k255_7392167 Species: Acidocella sp. MX-AZ02 (50%)	2	1548 bp	70.28	0.00	99.42
H2-16-all-fractions_k255_5393971 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1812 bp	71.19	1.08	99.83
H2-16-all-fractions_k255_7410079 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1586 bp	72.82	0.57	100.25
H2-16-all-fractions_k255_5397539 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1714 bp	69.66	0.35	99.77
H2-16-all-fractions_k255_2854757 Species: RLO_Gemmatimonadetes_68_9 (100%)	2	2062 bp	72.55	0.07	99.52
H2-16-all-fractions_k255_5404783 Species: RLO_Gemmatimonadetes_68_9 (100%)	2	2716 bp	74.52	0.28	100.07
H2-16-all-fractions_k255_2856396 Species: Pseudonocardia dioxanivorans (50%)	2	1620 bp	66.05	0.28	58.15
H2-16-all-fractions_k255_2859841 Species: Kitasatospora setae (50%)	2	1839 bp	72.16	0.16	100.00
H2-16-all-fractions_k255_7435817 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1675 bp	73.55	0.00	94.93
H2-16-all-fractions_k255_1099340 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1799 bp	69.04	1.17	79.71
H2-16-all-fractions_k255_2863079 Species: uncultured bacterium lac127 (50%)	2	3136 bp	69.99	0.67	98.53
H2-16-all-fractions_k255_7441947 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1715 bp	67.93	0.52	100.06
H2-16-all-fractions_k255_7445236 Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)	2	2277 bp	69.04	0.13	99.74
H2-16-all-fractions_k255_2883129 Species: Robiginitalea biformata (50%)	2	1701 bp	72.19	0.62	98.77
H2-16-all-fractions_k255_1121458 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1569 bp	69.02	0.76	91.40
H2-16-all-fractions_k255_7469335 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1729 bp	69.29	0.26	84.50
H2-16-all-fractions_k255_1136347 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	3639 bp	71.61	0.54	97.53
H2-16-all-fractions_k255_2912448 Species: RBG_16_Acidobacteria_68_9_curated (50%)	2	2458 bp	67.49	0.43	84.46
H2-16-all-fractions_k255_7520592 Species: Singulisphaera acidiphila (50%)	2	1694 bp	67.59	1.15	95.45
H2-16-all-fractions_k255_5477135 Species: RBG_19FT_COMBO_Nitrospirae_58_9_curated (50%)	2	1537 bp	70.53	1.66	91.35
H2-16-all-fractions_k255_7527893 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1511 bp	74.32	0.40	96.89
H2-16-all-fractions_k255_1162128 Species: Kribbella flavida (50%)	2	1721 bp	71.88	0.26	81.06
H2-16-all-fractions_k255_2929266 Species: Rhodopirellula europaea (50%)	2	1679 bp	69.09	0.45	96.49

Displaying items 201-250 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-16-all-fractions_metab_114) and add all its contigs / scaffolds to the organism you choose below

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Other organism

H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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