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H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %
Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3
Displaying items 251-300 of 1214 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-16-all-fractions_k255_1165708
Species: Pedosphaera parvula (50%)
2 1734 bp 69.95 0.26 96.71
H2-16-all-fractions_k255_2952191
Species: Conexibacter woesei (50%)
2 1532 bp 71.48 0.98 94.58
H2-16-all-fractions_k255_5480979
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1540 bp 70.32 0.78 97.60
H2-16-all-fractions_k255_2956229
Species: Streptomyces sp. MK498-98F14 (100%)
2 1519 bp 72.68 0.79 94.60
H2-16-all-fractions_k255_2978345
Species: R_Elusimicrobia_57_9 (50%)
2 1947 bp 69.90 0.23 100.15
H2-16-all-fractions_k255_1222928
Species: Desulfotomaculum gibsoniae (50%)
2 2527 bp 68.10 0.47 95.69
H2-16-all-fractions_k255_7583224
Species: Rubrobacter xylanophilus (50%)
2 2823 bp 68.86 0.16 81.40
H2-16-all-fractions_k255_1233312
Species: Rhodococcus sp. PML026 (50%)
2 1967 bp 69.24 0.84 86.17
H2-16-all-fractions_k255_3048471
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 2007 bp 70.45 0.07 95.22
H2-16-all-fractions_k255_5531919
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1567 bp 66.11 0.86 98.79
H2-16-all-fractions_k255_3058890
Species: GWC2_Nitrospirae_56_14_curated (50%)
2 1654 bp 73.22 0.63 99.76
H2-16-all-fractions_k255_1245781
Species: R_Gemmatimonadetes_71_11 (50%)
2 2253 bp 74.08 0.27 101.73
H2-16-all-fractions_k255_3094295
Species: Streptomyces sp. NRRL S-444 (50%)
2 1883 bp 70.15 0.24 94.00
H2-16-all-fractions_k255_7621707
Species: Nitrosococcus halophilus (50%)
2 2837 bp 69.62 0.37 98.24
H2-16-all-fractions_k255_1246096
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 3179 bp 71.28 0.66 99.56
H2-16-all-fractions_k255_5564538
Species: Haliangium ochraceum (50%)
2 1569 bp 72.21 0.10 84.70
H2-16-all-fractions_k255_7625538
Species: Pyrinomonas methylaliphatogenes (50%)
2 2103 bp 69.00 0.50 85.73
H2-16-all-fractions_k255_1275525
Species: RBG_16_Chloroflexi_68_14_curated (50%)
2 1628 bp 68.86 0.46 81.45
H2-16-all-fractions_k255_1276422
Species: R_Gemmatimonadetes_71_11 (50%)
2 1590 bp 66.92 0.09 100.19
H2-16-all-fractions_k255_3136537
Species: R_Betaproteobacteria_67_26 (50%)
2 1742 bp 70.61 0.09 98.68
H2-16-all-fractions_k255_7669219
Species: R_Gammaproteobacteria_60_43 (50%)
2 3307 bp 67.74 0.64 95.80
H2-16-all-fractions_k255_3138922
Species: Caldilinea aerophila (50%)
2 2291 bp 64.56 0.20 89.83
H2-16-all-fractions_k255_3156153
Species: Candidatus Competibacter denitrificans (50%)
2 2561 bp 69.58 0.94 87.04
H2-16-all-fractions_k255_5614603
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1586 bp 69.23 0.47 99.68
H2-16-all-fractions_k255_7674883
Species: Skermanella aerolata (50%)
2 2184 bp 65.52 1.24 90.80
H2-16-all-fractions_k255_1325762
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)
2 1859 bp 69.39 0.00 95.70
H2-16-all-fractions_k255_5621507
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1639 bp 68.03 0.64 86.21
H2-16-all-fractions_k255_5622273
Species: Gemmatimonas aurantiaca (50%)
2 2190 bp 71.10 0.27 98.49
H2-16-all-fractions_k255_7704886
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 3357 bp 69.62 0.58 97.94
H2-16-all-fractions_k255_3174844
Species: Rubinisphaera brasiliensis (50%)
2 2092 bp 69.93 2.15 97.51
H2-16-all-fractions_k255_3184035
Species: Catenulispora acidiphila (50%)
2 1865 bp 67.51 4.66 50.35
H2-16-all-fractions_k255_7727259
Species: Nocardioides luteus (50%)
2 1744 bp 70.47 0.60 91.69
H2-16-all-fractions_k255_1371892
Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)
2 1609 bp 70.35 0.19 98.63
H2-16-all-fractions_k255_1383448
Species: RBG_16_Acidobacteria_64_8_curated (50%)
2 2066 bp 69.46 12.85 97.29
H2-16-all-fractions_k255_5655054
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 2240 bp 67.19 0.60 88.39
H2-16-all-fractions_k255_1397167
Species: Micromonospora carbonacea (50%)
2 1607 bp 69.26 0.37 98.38
H2-16-all-fractions_k255_7789716
Species: RLO_Rhodospirillales_67_15 (50%)
2 3071 bp 73.43 0.44 97.10
H2-16-all-fractions_k255_5717779
Species: Nostoc punctiforme (50%)
2 2077 bp 70.25 0.29 100.10
H2-16-all-fractions_k255_7802452
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1549 bp 69.40 0.10 99.94
H2-16-all-fractions_k255_3232819
Species: Asaia platycodi (50%)
2 1849 bp 69.23 0.57 60.84
H2-16-all-fractions_k255_7803664
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1569 bp 70.62 0.96 95.03
H2-16-all-fractions_k255_1425316
Species: Methylobacterium sp. 4-46 (50%)
2 2176 bp 68.98 0.07 98.99
H2-16-all-fractions_k255_7807461
Species: RIFOXYD12_FULL_Ignavibacteria_36_8_curated (50%)
2 2266 bp 70.43 0.26 84.20
H2-16-all-fractions_k255_5764857
Species: Gemmatimonas aurantiaca (50%)
2 1981 bp 72.94 0.61 98.28
H2-16-all-fractions_k255_5768714
Species: R_NC10_66_22 (50%)
2 1795 bp 70.86 0.33 98.94
H2-16-all-fractions_k255_7811034
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 3130 bp 71.88 0.67 97.09
H2-16-all-fractions_k255_1443193
Species: Stigmatella aurantiaca (50%)
2 3955 bp 70.90 0.30 98.15
H2-16-all-fractions_k255_1444446
Species: R_Acidobacteria_65_29 (50%)
2 2177 bp 72.85 0.28 99.08
H2-16-all-fractions_k255_3258681
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 2606 bp 70.11 0.12 98.89
H2-16-all-fractions_k255_5784236
Species: Desulfovibrio fructosivorans (50%)
2 1988 bp 72.99 0.15 74.09
Displaying items 251-300 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.