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H2-16-all-fractions_k255_267012

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_267012_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..987)
DNA (987bp) protein (329aa)
ribonucleoside diphosphate reductase, B12-dependent (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent id=2566072 bin=GWC2_Chloroflexi_73_18 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
H2-16-all-fractions_k255_267012_2
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

1265..1762
DNA (498bp) protein (166aa)
Transcriptional repressor NrdR n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LY15_ACIFD
ATP-cone domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
H2-16-all-fractions_k255_267012_3
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1759..2025)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMX9_9MICO
LysM domain-containing protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
H2-16-all-fractions_k255_267012_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2219..2851
DNA (633bp) protein (211aa)
LexA family transcriptional regulator (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
umuDC operon protein-like protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003647B35
H2-16-all-fractions_k255_267012_5
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2942..4432)
DNA (1491bp) protein (497aa)
GTPase HflX n=1 Tax=Frankia sp. QA3 RepID=I8QUA0_9ACTO
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
ATP/GTP-binding protein
H2-16-all-fractions_k255_267012_6
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

comp(4512..5678)
DNA (1167bp) protein (389aa)
LL-diaminopimelate aminotransferase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=DAPAT_DESAP
LL-diaminopimelate aminotransferase
Tax=BJP_IG2158_Actinobacteria_57_21
H2-16-all-fractions_k255_267012_7
unknown

Not on your lists

comp(5902..6210)
DNA (309bp) protein (103aa)

This feature has no annotations

H2-16-all-fractions_k255_267012_8
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6383..7198)
DNA (816bp) protein (272aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YM81_9FIRM
Tax=BJP_IG2102_Coriobacteriales_64_17
H2-16-all-fractions_k255_267012_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7202..8200)
DNA (999bp) protein (333aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Salinispora arenicola RepID=UPI00037F4000
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_267012_10
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8197..9066)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J772_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDA43655.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
H2-16-all-fractions_k255_267012_11
Gordonia sp. no. 9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9075..10655)
DNA (1581bp) protein (527aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1617449 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. no. 9.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LJ10_9ACTO
2-methylthioadenine synthetase
H2-16-all-fractions_k255_267012_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10711..12285)
DNA (1575bp) protein (525aa)
RNA binding metal dependent phosphohydrolase (EC:3.1.4.16)
ribonuclease Y n=1 Tax=Nonomuraea coxensis RepID=UPI00036B30AF
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_267012_13
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12699..13241)
DNA (543bp) protein (181aa)
Regulatory protein RecX n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RDW6_FRAAA
recX; recombination regulator RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
H2-16-all-fractions_k255_267012_14
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13279..14388)
DNA (1110bp) protein (370aa)
recombinase RecA n=1 Tax=Streptomyces vitaminophilus RepID=UPI000360A4B7
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
recombinase RecA
H2-16-all-fractions_k255_267012_15
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14530..15132)
DNA (603bp) protein (201aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
2'-5' RNA ligase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGJ3_ANASK
2'-5' RNA ligase
H2-16-all-fractions_k255_267012_16
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15245..16498)
DNA (1254bp) protein (418aa)
damage-inducible protein CinA n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036C9D4E
competence-inducible (CinA-like) protein
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
H2-16-all-fractions_k255_267012_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16538..17908)
DNA (1371bp) protein (457aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000366A1A0
ribosomal protein S12 methylthiotransferase
H2-16-all-fractions_k255_267012_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17946..18905)
DNA (960bp) protein (320aa)
ATPase involved in chromosome partitioning-like protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A4I3_THECD
chromosome partitioning ATPase
ATPase involved in chromosome partitioning-like protein {ECO:0000313|EMBL:ACY96218.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
H2-16-all-fractions_k255_267012_19
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19181..19750)
DNA (570bp) protein (190aa)
Secretion protein Snm4 n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KRR9_9ACTO
Secretion protein Snm4 {ECO:0000313|EMBL:EKX63496.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
H2-16-all-fractions_k255_267012_20
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20519..20785)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2Q4G8_STRC2
Putative uncharacterized protein {ECO:0000313|EMBL:EFG07006.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
hypothetical protein
H2-16-all-fractions_k255_267012_21
unknown

Not on your lists

comp(20815..21132)
DNA (318bp) protein (106aa)

This feature has no annotations

H2-16-all-fractions_k255_267012_22
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21133..22638)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82BF4_STRAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC73463.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
H2-16-all-fractions_k255_267012_23
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22651..22956)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4F7A9_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQD86372.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
H2-16-all-fractions_k255_267012_24
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22956..23264)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NCF6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDS89537.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
hypothetical protein
H2-16-all-fractions_k255_267012_25
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23280..23615)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4F7B1_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL99935.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
H2-16-all-fractions_k255_267012_26
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23750..27724
DNA (3975bp) protein (1325aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NE51_9ACTO
Cell division protein FtsK {ECO:0000313|EMBL:KDS89544.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
cell division protein FtsK/SpoIIIE
H2-16-all-fractions_k255_267012_27
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27721..28089
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000370E837
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE83332.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
H2-16-all-fractions_k255_267012_28
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28086..29093
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZJK2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDQ67414.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
hypothetical protein
H2-16-all-fractions_k255_267012_29
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(29157..30623)
DNA (1467bp) protein (489aa)
inosine monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase id=3526261 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
H2-16-all-fractions_k255_267012_30
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30634..31365)
DNA (732bp) protein (244aa)
Transcriptional regulator, XRE family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJK2_MOOTA
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABC19387.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
Displaying items 1-30 of 31 in total

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