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H2-16-all-fractions_k255_1260912

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_1260912_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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243..2057
DNA (1815bp) protein (605aa)
translation initiation factor IF-2 n=1 Tax=Nonomuraea coxensis RepID=UPI00037C6C69
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
translation initiation factor IF-2
H2-16-all-fractions_k255_1260912_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2114..2404
DNA (291bp) protein (97aa)
Uncharacterized conserved protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MQV2_SACVD
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_1260912_3
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2411..2809
DNA (399bp) protein (133aa)
Ribosome-binding factor A n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WCN3_9MICO
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
ribosome-binding factor A
H2-16-all-fractions_k255_1260912_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2806..3801
DNA (996bp) protein (332aa)
Exopolyphosphatase-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXT3_STRRD
exopolyphosphatase-like protein
Exopolyphosphatase-like protein {ECO:0000313|EMBL:ACZ85104.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
H2-16-all-fractions_k255_1260912_5
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3824..4681
DNA (858bp) protein (286aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
tRNA pseudouridine synthase B n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E5A9_9MICO
tRNA pseudouridine synthase B
H2-16-all-fractions_k255_1260912_6
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4770..5717
DNA (948bp) protein (316aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Riboflavin biosynthesis protein ribF n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RD77_9ACTO
putative riboflavin kinase
H2-16-all-fractions_k255_1260912_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5970..6236
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W8G9_9ACTO
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
H2-16-all-fractions_k255_1260912_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6523..8733
DNA (2211bp) protein (737aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
polynucleotide phosphorylase n=1 Tax=Nocardiopsis alkaliphila RepID=UPI00034C8462
polynucleotide phosphorylase/polyadenylase
H2-16-all-fractions_k255_1260912_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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8738..10015
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000364A569
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ABK53279.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
H2-16-all-fractions_k255_1260912_10
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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10012..10680
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQG2_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU59808.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
H2-16-all-fractions_k255_1260912_11
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10759..12252
DNA (1494bp) protein (498aa)
Myeloperoxidase, thyroid peroxidase,cyclooxygenase catalytic domain n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DYU2_9MICO
Myeloperoxidase, thyroid peroxidase,cyclooxygenase catalytic domain {ECO:0000313|EMBL:CCH68531.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
peroxidase
H2-16-all-fractions_k255_1260912_12
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12260..12943)
DNA (684bp) protein (228aa)
GCN5 N-acetyltransferase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RB32_9ACTO
GCN5 N-acetyltransferase {ECO:0000313|EMBL:EEP73804.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
H2-16-all-fractions_k255_1260912_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13038..13835
DNA (798bp) protein (266aa)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2V9W9_9NOCA
dihydrodipicolinate reductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_1260912_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13871..15532
DNA (1662bp) protein (554aa)
putative thymidylate synthase (EC:2.1.1.-)
Putative thymidylate synthase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A335_9ACTN
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
H2-16-all-fractions_k255_1260912_15
unknown

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15631..16215
DNA (585bp) protein (195aa)

This feature has no annotations

H2-16-all-fractions_k255_1260912_16
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16240..16611)
DNA (372bp) protein (124aa)
histidine kinase n=1 Tax=Streptomyces rapamycinicus RepID=UPI000383036B
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AGP55134.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
H2-16-all-fractions_k255_1260912_17
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16652..20374)
DNA (3723bp) protein (1241aa)
alpha-ketoglutarate decarboxylase n=1 Tax=Actinomadura flavalba RepID=UPI000375E7A9
2-oxoglutarate dehydrogenase, E1 subunit
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ACY99208.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
H2-16-all-fractions_k255_1260912_18
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(20445..21044)
DNA (600bp) protein (200aa)
Putative TetR family transcriptional regulator n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WAL1_9ACTO
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAB89237.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
H2-16-all-fractions_k255_1260912_19
unknown

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21234..21551
DNA (318bp) protein (106aa)

This feature has no annotations

H2-16-all-fractions_k255_1260912_20
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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21598..25377
DNA (3780bp) protein (1260aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000368212B
DEAD/DEAH box helicase
DEAD/H associated domain protein {ECO:0000313|EMBL:AEH10891.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Displaying 20 items

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