ggKbase home page

H2-16-all-fractions_k255_1332498

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_1332498_1
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(444..4076)
DNA (3633bp) protein (1211aa)
Chromosome partition protein Smc n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1J2_PSEUX
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
chromosome segregation protein SMC
H2-16-all-fractions_k255_1332498_2
unknown

Not on your lists

comp(4201..4386)
DNA (186bp) protein (62aa)

This feature has no annotations

H2-16-all-fractions_k255_1332498_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(4713..4988)
DNA (276bp) protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] id=14630243 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin8_Chloro organism_group=Chloroflexi
acylphosphatase
Tax=CSP1_4_Chloroflexi
H2-16-all-fractions_k255_1332498_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4985..5788)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Nocardiopsis prasina RepID=UPI00035EA02D
Uncharacterized protein {ECO:0000313|EMBL:KEP76044.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
H2-16-all-fractions_k255_1332498_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5776..6621)
DNA (846bp) protein (282aa)
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Saccharomonospora glauca K62 RepID=I1CZ38_9PSEU
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_1332498_6
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6678..7526)
DNA (849bp) protein (283aa)
DNA lyase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KP87_9MICO
DNA lyase {ECO:0000313|EMBL:EQM78522.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
DNA lyase
H2-16-all-fractions_k255_1332498_7
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7528..8292)
DNA (765bp) protein (255aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000255|HAMAP-Rule:MF_00104}; EC=3.1.26.3 {ECO:0000255|HAMAP-Rule:MF_00104};; Ribonuclease III {ECO:0000255|HAMAP-Rule:MF_00104}; Short=RNase III {ECO:0000255|HAMAP-Rule:MF_00104};; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
ribonuclease III n=1 Tax=Nocardiopsis salina RepID=UPI0003487BEE
H2-16-all-fractions_k255_1332498_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


comp(8264..8440)
DNA (177bp) protein (59aa)
50S ribosomal protein L32 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHK3_9FIRM
rpmF; 50S ribosomal protein L32
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_1332498_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8421..8984)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTI3_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_1332498_10
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9087..9572)
DNA (486bp) protein (162aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; EC=2.7.7.3 {ECO:0000255|HAMAP-Rule:MF_00151};; Dephospho-CoA pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; Short=PPAT {ECO:0000255|HAMAP-Rule:MF_00151};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Phosphopantetheine adenylyltransferase n=1 Tax=Frankia sp. CN3 RepID=G6HJB8_9ACTO
H2-16-all-fractions_k255_1332498_11
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9642..10208)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DJ40_9NOCA
Ribosomal RNA small subunit methyltransferase D
Ribosomal RNA small subunit methyltransferase D {ECO:0000313|EMBL:AJW39503.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
H2-16-all-fractions_k255_1332498_12
unknown

Not on your lists

comp(10369..11202)
DNA (834bp) protein (278aa)

This feature has no annotations

H2-16-all-fractions_k255_1332498_13
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11395..12225)
DNA (831bp) protein (277aa)
Putative transcriptional regulator n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F3W2_9CYAN
Putative transcriptional regulator {ECO:0000313|EMBL:EKV03960.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
transcriptional regulator TrmB
H2-16-all-fractions_k255_1332498_14
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12258..14378)
DNA (2121bp) protein (707aa)
ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PM4_SYMTH
ATP-dependent DNA helicase RecG
Tax=RBG_16_Actinobacteria_68_21_curated
H2-16-all-fractions_k255_1332498_15
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14473..14664
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R5D9_STRVP
LSU ribosomal protein L28p
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
H2-16-all-fractions_k255_1332498_16
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14661..15842)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A7C4_CELGA
hypothetical protein
Permease {ECO:0000313|EMBL:KGM01515.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
H2-16-all-fractions_k255_1332498_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16012..16629
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00035E87AA
Uncharacterized protein {ECO:0000313|EMBL:CCF85694.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
H2-16-all-fractions_k255_1332498_18
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16626..17066)
DNA (441bp) protein (147aa)
NUDIX hydrolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT07_RUBXD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABG05471.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
H2-16-all-fractions_k255_1332498_19
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17070..17945)
DNA (876bp) protein (292aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AEH10973.1}; EC=2.7.4.7 {ECO:0000313|EMBL:AEH10973.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Phosphomethylpyrimidine kinase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B465_FRADG
H2-16-all-fractions_k255_1332498_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18014..18463
DNA (450bp) protein (150aa)
Pyridoxamine 5''-phosphate oxidase id=4696791 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
H2-16-all-fractions_k255_1332498_21
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18465..20060)
DNA (1596bp) protein (532aa)
aldehyde dehydrogenase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A3BA
hypothetical protein
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H2-16-all-fractions_k255_1332498_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20286..21638
DNA (1353bp) protein (451aa)
monoamine oxidase (EC:1.4.3.4)
Monoamine oxidase {ECO:0000313|EMBL:BAI75019.1}; EC=1.4.3.4 {ECO:0000313|EMBL:BAI75019.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037541B1
H2-16-all-fractions_k255_1332498_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21753..22757)
DNA (1005bp) protein (335aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Thiamine-monophosphate kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1M5_PSEUX
H2-16-all-fractions_k255_1332498_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22776..24317)
DNA (1542bp) protein (514aa)
PckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VNH5_CLOBI
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_1332498_25
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24353..25012)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000366BC54
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACA60711.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
H2-16-all-fractions_k255_1332498_26
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25193..25426
DNA (234bp) protein (78aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AVL5_STRRD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACY98982.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
H2-16-all-fractions_k255_1332498_27
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25423..26541)
DNA (1119bp) protein (373aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
Phosphoserine aminotransferase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JVN6_STRHJ
aminotransferase
H2-16-all-fractions_k255_1332498_28
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26594..27796
DNA (1203bp) protein (401aa)
Aspartate aminotransferase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MJY9_9ACTO
Aminotransferase class I and II {ECO:0000313|EMBL:AKG43503.1}; TaxID=408015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
class I and II aminotransferase
H2-16-all-fractions_k255_1332498_29
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27861..28307
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Tu6071 RepID=F3ZA11_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIF77855.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
MarR family transcriptional regulator
H2-16-all-fractions_k255_1332498_30
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28304..29623
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00035DB1EF
Uncharacterized protein {ECO:0000313|EMBL:CCM62572.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
integral membrane efflux protein
Displaying items 1-30 of 56 in total

View Taxonomy