ggKbase home page

H2-16-all-fractions_k255_2598309

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_2598309_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5..1138)
DNA (1134bp) protein (378aa)
CBS domain protein n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BJ45_9MYCO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60662.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
peptidase m50
H2-16-all-fractions_k255_2598309_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

1278..2882
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036034CC
putative dehydrogenase/oxidoreductase
Putative dehydrogenase/oxidoreductase {ECO:0000313|EMBL:BAL99912.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
H2-16-all-fractions_k255_2598309_3
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3041..4318
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034BD206
two-component system sensor kinase
Two-component system sensor kinase {ECO:0000313|EMBL:AJE83267.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
H2-16-all-fractions_k255_2598309_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4315..4971
DNA (657bp) protein (219aa)
DNA-binding response regulator LuxR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E6G1_9ACTN
DNA-binding response regulator LuxR family {ECO:0000313|EMBL:EHN10750.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
yxjL; transcriptional regulatory protein yxjL
H2-16-all-fractions_k255_2598309_5
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4986..5939)
DNA (954bp) protein (318aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Arthrobacter sp. SJCon RepID=L8TW45_9MICC
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ELT45464.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
binding-protein-dependent transport systems inner membrane component
H2-16-all-fractions_k255_2598309_6
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5936..6895)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037CAABF
Transporter {ECO:0000313|EMBL:KIF26142.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
binding-protein-dependent transport systems inner membrane component
H2-16-all-fractions_k255_2598309_7
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6921..8318)
DNA (1398bp) protein (466aa)
ABC-type sugar transport system, extracellular solute-binding protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L2P8_9ACTO
ABC-type sugar transport system, extracellular solute-binding protein {ECO:0000313|EMBL:CCH18095.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
family 1 extracellular solute-binding protein
H2-16-all-fractions_k255_2598309_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8529..8984
DNA (456bp) protein (152aa)
membrane protein n=1 Tax=Saccharomonospora halophila RepID=UPI00036470C4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY95764.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
H2-16-all-fractions_k255_2598309_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9088..9819
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LCS1_9ACTO
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62853.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
H2-16-all-fractions_k255_2598309_10
unknown

Not on your lists

comp(9782..10009)
DNA (228bp) protein (76aa)

This feature has no annotations

H2-16-all-fractions_k255_2598309_11
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10157..12205
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI00034C71DA
Peptidase S9 {ECO:0000313|EMBL:KII00332.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
prolyl oligopeptidase family protein
H2-16-all-fractions_k255_2598309_12

Not on your lists

12210..13142
DNA (933bp) protein (311aa)
Lipolytic enzyme n=1 Tax=uncultured bacterium RepID=B8Y564_9BACT
Lipolytic enzyme {ECO:0000313|EMBL:ACL67848.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
esterase
H2-16-all-fractions_k255_2598309_13
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13147..14037)
DNA (891bp) protein (297aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VUW2_9CYAN
polyphosphate:nucleotide phosphotransferase
Polyphosphate:nucleotide phosphotransferase, PPK2 family {ECO:0000313|EMBL:AFZ11746.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
H2-16-all-fractions_k255_2598309_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14209..15855)
DNA (1647bp) protein (549aa)
gcvPB; glycine dehydrogenase subunit beta (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5W8_9BACI
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_2598309_15
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(15861..17339)
DNA (1479bp) protein (493aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L4I5_9BACT
glycine cleavage system protein P
H2-16-all-fractions_k255_2598309_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(17539..18336)
DNA (798bp) protein (266aa)
Uncharacterized protein id=4580775 bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_2598309_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18345..18944)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0002E2FFE3
transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AIY19908.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H2-16-all-fractions_k255_2598309_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(19093..19566)
DNA (474bp) protein (158aa)
Uncharacterized conserved protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MXI6_SACVD
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_2598309_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(19690..20337)
DNA (648bp) protein (216aa)
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EKY6_9FIRM
HGPRTase: hypoxanthine phosphoribosyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_2598309_20
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(20387..21757)
DNA (1371bp) protein (457aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLU7_THEM7
Tax=RBG_13_Actinobacteria_55_18_curated
Displaying 20 items

View Taxonomy