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H2-16-all-fractions_k255_4463722

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_4463722_1
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

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comp(518..754)
DNA (237bp) protein (79aa)
DNA-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B728BC
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:KGA10692.1}; TaxID=1504318 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
excisionase family DNA binding domain-containing protein
H2-16-all-fractions_k255_4463722_2
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1035..1439
DNA (405bp) protein (135aa)
HxlR family transcriptional regulator n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SZ02_AMYOR
HxlR family transcriptional regulator
HxlR family transcriptional regulator {ECO:0000313|EMBL:AJK56647.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H2-16-all-fractions_k255_4463722_3
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1447..1902)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5Y3_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ36210.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
H2-16-all-fractions_k255_4463722_4
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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1997..2797
DNA (801bp) protein (267aa)
Chromosome partitioning protein Soj n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSR7_9BACT
Chromosome partitioning protein Soj {ECO:0000313|EMBL:BAL59203.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
parA; Chromosome partitioning protein ParA
H2-16-all-fractions_k255_4463722_5
unknown

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2754..3359
DNA (606bp) protein (202aa)

This feature has no annotations

H2-16-all-fractions_k255_4463722_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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3516..4112
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000367298A
copper-binding protein
Tax=RBG_16_RIF_CHLX_72_14_curated
H2-16-all-fractions_k255_4463722_7
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4109..4636)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QJV4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC67722.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
hypothetical protein
H2-16-all-fractions_k255_4463722_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4665..5054
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003450458
ArsR family transcriptional regulator {ECO:0000313|EMBL:AKF83894.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
ArsR family transcriptional regulator
H2-16-all-fractions_k255_4463722_9
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5055..5507
DNA (453bp) protein (151aa)
Uncharacterized protein id=4923945 bin=GWC2_Chloroflexi_73_18 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
H2-16-all-fractions_k255_4463722_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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5596..6768
DNA (1173bp) protein (391aa)
Two-component system histidine kinase n=3 Tax=Amycolatopsis mediterranei RepID=D8I8J9_AMYMU
Uncharacterized protein {ECO:0000313|EMBL:ETK35177.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
two-component system histidine kinase
H2-16-all-fractions_k255_4463722_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6765..7430
DNA (666bp) protein (222aa)
Response regulator receiver protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AR30_STRRD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACZ88371.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
H2-16-all-fractions_k255_4463722_12
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7563..8462
DNA (900bp) protein (300aa)
ABC transporter ATP-binding protein n=1 Tax=Salinispora pacifica RepID=UPI000360CAA7
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM13631.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
H2-16-all-fractions_k255_4463722_13
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8459..9208
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEU5_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:KGH44689.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
H2-16-all-fractions_k255_4463722_14
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

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comp(9201..9740)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9GW02_DAPPU
Putative uncharacterized protein {ECO:0000313|EMBL:EFX76357.1}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
hypothetical protein
H2-16-all-fractions_k255_4463722_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9913..10572
DNA (660bp) protein (220aa)
Metallo-dependent hydrolase (EC:3.1.8.1)
Parathion hydrolase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3F3_CAUCN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 15 items

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