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H2-16-all-fractions_k255_4606621

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_4606621_1
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..572)
DNA (570bp) protein (190aa)
60 kDa chaperonin n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XNW3_MICPN
groEL; molecular chaperone GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
H2-16-all-fractions_k255_4606621_2
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(591..884)
DNA (294bp) protein (98aa)
10 kDa chaperonin n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6V413_9MICO
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1184607 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
groES; co-chaperonin GroES
H2-16-all-fractions_k255_4606621_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


comp(1010..2059)
DNA (1050bp) protein (350aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=TSAD_ACIC1
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_4606621_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2062..2625)
DNA (564bp) protein (188aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZY47_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_4606621_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2625..3356)
DNA (732bp) protein (244aa)
Peptidase M22 family protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZX16_9ACTN
peptidase M22 family protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_4606621_6
unknown

Not on your lists

comp(3417..4295)
DNA (879bp) protein (293aa)

This feature has no annotations

H2-16-all-fractions_k255_4606621_7
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4395..5123)
DNA (729bp) protein (243aa)
ABC-2 type transporter n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NSG1_STRVO
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
H2-16-all-fractions_k255_4606621_8
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5099..6187)
DNA (1089bp) protein (363aa)
ABC transporter n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382FDD1
Daunorubicin resistance ABC transporter ATPasesubunit {ECO:0000313|EMBL:CDR07978.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
ABC transporter
H2-16-all-fractions_k255_4606621_9
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6278..7042
DNA (765bp) protein (255aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WU83_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:EFL24317.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
tetracycline repressor
H2-16-all-fractions_k255_4606621_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..8204
DNA (1170bp) protein (390aa)
Putative peptidase family M20/M25/M40 n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9U5_9ZZZZ
Peptidase M20 {ECO:0000313|EMBL:ETW93204.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase
H2-16-all-fractions_k255_4606621_11
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8172..8654)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I670_DESAP
ATPase or kinase
Uncharacterized protein {ECO:0000313|EMBL:ACA60507.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
H2-16-all-fractions_k255_4606621_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8658..10346)
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI000301EF99
phage DNA polymerase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
H2-16-all-fractions_k255_4606621_13
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(10374..10592)
DNA (219bp) protein (73aa)
FmdB family regulatory protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BZF6_9GAMM
regulatory protein, FmdB family
Tax=CG_Proteo_01
H2-16-all-fractions_k255_4606621_14
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(10592..11569)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI000373B52B
peptidase S58, DmpA
Tax=RBG_13_Actinobacteria_55_18_curated
H2-16-all-fractions_k255_4606621_15
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11577..12914)
DNA (1338bp) protein (446aa)
Putative hydrolase n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JZB7_STREN
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ62490.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hydrolase
H2-16-all-fractions_k255_4606621_16
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12914..14101)
DNA (1188bp) protein (396aa)
Alanine racemase {ECO:0000255|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000255|HAMAP-Rule:MF_01201};; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
alanine racemase n=1 Tax=Streptomyces RepID=UPI000368525B
alanine racemase
H2-16-all-fractions_k255_4606621_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14139..15740)
DNA (1602bp) protein (534aa)
YjeF-related protein-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXV8_RUBXD
YjeF-like protein
YjeF-related protein-like protein {ECO:0000313|EMBL:ABG03770.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
H2-16-all-fractions_k255_4606621_18
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15763..16224)
DNA (462bp) protein (154aa)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=ACPS_SYMTH
acpS; 4'-phosphopantetheinyl transferase
Tax=BJP_08E140C01_Coriobacteriales_62_12
H2-16-all-fractions_k255_4606621_19
unknown

Not on your lists

comp(16221..16553)
DNA (333bp) protein (111aa)

This feature has no annotations

H2-16-all-fractions_k255_4606621_20
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16558..18393)
DNA (1836bp) protein (612aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GYP4_ACTM4
putative L-glutamine-D-fructose-6-phosphate amidotransferase
H2-16-all-fractions_k255_4606621_21
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18461..19813)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00037D8F5D
hypothetical protein
H2-16-all-fractions_k255_4606621_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


comp(19836..20234)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Saccharomonospora halophila RepID=UPI00036AFD4A
30S ribosomal protein S9
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_4606621_23
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20247..20714)
DNA (468bp) protein (156aa)
50S ribosomal protein L13 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRQ5_ACIC1
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
H2-16-all-fractions_k255_4606621_24
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20962..21816)
DNA (855bp) protein (285aa)
Putative lipid kinase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFK9_9ACTO
Putative lipid kinase {ECO:0000313|EMBL:EFQ82110.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
lipid kinase
H2-16-all-fractions_k255_4606621_25

Not on your lists

21909..22424
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLT8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD99032.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
H2-16-all-fractions_k255_4606621_26
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22384..23136)
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
tRNA pseudouridine synthase A n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A345_THECD
H2-16-all-fractions_k255_4606621_27
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(23410..24255)
DNA (846bp) protein (282aa)
50S ribosomal protein L17 n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F3Q8_MODMB
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
H2-16-all-fractions_k255_4606621_28
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24316..25251)
DNA (936bp) protein (312aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037130B5
DNA-directed RNA polymerase subunit alpha
Displaying 28 items

View Taxonomy