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H2-16-all-fractions_k255_7385125

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_7385125_1
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(905..2167)
DNA (1263bp) protein (421aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
tyrosyl-tRNA synthetase n=1 Tax=Laceyella sacchari RepID=UPI0003B7B51D
H2-16-all-fractions_k255_7385125_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

2268..3464
DNA (1197bp) protein (399aa)
Methyltransferase small id=1297417 bin=GWE1_Spirochaete_60_18 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
methyltransferase small
Tax=RBG_16_Chloroflexi_68_14_curated
H2-16-all-fractions_k255_7385125_3
unknown

Not on your lists

3635..3739
DNA (105bp) protein (35aa)

This feature has no annotations

H2-16-all-fractions_k255_7385125_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4276..5049)
DNA (774bp) protein (258aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000364753F
DNA-3-methyladenine glycosylase
H2-16-all-fractions_k255_7385125_5
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5046..6776)
DNA (1731bp) protein (577aa)
PHP domain protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IXB8_9PSEU
PHP domain-containing protein
PHP domain-containing protein {ECO:0000313|EMBL:AIR96599.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
H2-16-all-fractions_k255_7385125_6
unknown

Not on your lists

comp(6792..7355)
DNA (564bp) protein (188aa)

This feature has no annotations

H2-16-all-fractions_k255_7385125_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7369..8301)
DNA (933bp) protein (311aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=OTC_FRASN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_7385125_8
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(8298..8687)
DNA (390bp) protein (130aa)
Response regulator receiver domain protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SF52_9ACTO
transcriptional regulator
Tax=RBG_13_Chloroflexi_60_13_curated
H2-16-all-fractions_k255_7385125_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8743..9918)
DNA (1176bp) protein (392aa)
glutamate N-acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS31_RUBXD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
H2-16-all-fractions_k255_7385125_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10072..12480)
DNA (2409bp) protein (803aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000375C3DF
H2-16-all-fractions_k255_7385125_11
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12496..13545)
DNA (1050bp) protein (350aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1460244 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BYV2_STRBB
pheS; phenylalanyl-tRNA synthetase subunit alpha
H2-16-all-fractions_k255_7385125_12
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13628..14692)
DNA (1065bp) protein (355aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00036355AF
PAS/PAC sensor signal transduction histidine kinase
H2-16-all-fractions_k255_7385125_13
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14682..15497)
DNA (816bp) protein (272aa)
RNA methyltransferase n=1 Tax=Nonomuraea coxensis RepID=UPI00035C4CF2
RNA methyltransferase {ECO:0000313|EMBL:AKH81456.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
tRNA/rRNA methyltransferase SpoU
H2-16-all-fractions_k255_7385125_14
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15520..15903)
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=1 Tax=Actinokineospora enzanensis RepID=UPI00037085D4
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
H2-16-all-fractions_k255_7385125_15
uncultured actinobacterium HF4000_04C13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15946..16140)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=uncultured actinobacterium HF4000_04C13 RepID=E0XVC8_9ACTN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=711002 species="Bacteria; Actinobacteria; environmental samples.;" source="uncultured actinobacterium HF4000_04C13.;"
50S ribosomal protein L35
H2-16-all-fractions_k255_7385125_16
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16156..16659)
DNA (504bp) protein (168aa)
translation initiation factor IF-3 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3785E
translation initiation factor 3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
H2-16-all-fractions_k255_7385125_17
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

16966..17373
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00036C2106
Tax=BJP_IG2158_Actinobacteria_57_21
H2-16-all-fractions_k255_7385125_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(17491..17694)
DNA (204bp) protein (68aa)
Conserved domain protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9USK4_9ACTO
cspD; cold shock-like protein CspD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_7385125_19
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17823..18698)
DNA (876bp) protein (292aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
ATP phosphoribosyltransferase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUD2_ACIC1
H2-16-all-fractions_k255_7385125_20
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18720..19193)
DNA (474bp) protein (158aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQB4_KYRT2
H2-16-all-fractions_k255_7385125_21

Not on your lists

comp(19190..20464)
DNA (1275bp) protein (425aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=uncultured bacterium A1Q1_fos_862 RepID=L7VZM5_9BACT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1256590 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_862.;"
riBBA; riboflavin biosynthesis protein ribBA
H2-16-all-fractions_k255_7385125_22
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20461..21066)
DNA (606bp) protein (202aa)
Riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase subunit alpha n=1 Tax=Streptomyces fulvissimus DSM 40593 RepID=N0CLV1_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61231.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
H2-16-all-fractions_k255_7385125_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(21067..22227)
DNA (1161bp) protein (387aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193) id=14430271 bin=bin3_NC10 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_7385125_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22475..23404)
DNA (930bp) protein (310aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUD7_ACIC1
response regulator receiver modulated diguanylate cyclase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-16-all-fractions_k255_7385125_25
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23416..24081)
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1337888 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus GBlys.;"
Ribulose-phosphate 3-epimerase n=6 Tax=Geobacillus RepID=Q5L0R7_GEOKA
ribulose-phosphate 3-epimerase
H2-16-all-fractions_k255_7385125_26
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24160..25449)
DNA (1290bp) protein (430aa)
Fmu (Sun) domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJG3_NOCSJ
Fmu (Sun) domain-containing protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:ABL81948.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 26 items

View Taxonomy