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H2-16-all-fractions_k255_183704

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_183704_1
unknown

Not on your lists

comp(2..118)
DNA (117bp) protein (39aa)

This feature has no annotations

H2-16-all-fractions_k255_183704_2
unknown

Not on your lists

136..405
DNA (270bp) protein (90aa)

This feature has no annotations

H2-16-all-fractions_k255_183704_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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466..2712
DNA (2247bp) protein (749aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
DNA topoisomerase IV subunit A (EC:5.99.1.3)
DNA topoisomerase 4 subunit A n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2G3_SPHWW
H2-16-all-fractions_k255_183704_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2773..4515
DNA (1743bp) protein (581aa)
diguanylate cyclase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B23C
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AGH50765.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_183704_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4512..5138)
DNA (627bp) protein (209aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas elodea RepID=UPI00026313AA
Uncharacterized protein {ECO:0000313|EMBL:EZP49307.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
polysaccharide deacetylase
H2-16-all-fractions_k255_183704_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5344..6591
DNA (1248bp) protein (416aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031DCBB5
Glycosyl transferase family 1 {ECO:0000313|EMBL:KFD27677.1}; Putative glycosyltransferase {ECO:0000313|EMBL:KEZ13029.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
group 1 glycosyl transferase
H2-16-all-fractions_k255_183704_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6565..7776)
DNA (1212bp) protein (404aa)
Polynucleotide adenylyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4R5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE57296.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
polynucleotide adenylyltransferase
H2-16-all-fractions_k255_183704_8

Not on your lists

comp(7767..8357)
DNA (591bp) protein (197aa)
NUDIX domain n=1 Tax=uncultured organism RepID=T1WCD4_9ZZZZ
NUDIX domain {ECO:0000313|EMBL:AGU11805.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
NUDIX hydrolase
H2-16-all-fractions_k255_183704_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8357..8977)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S746_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50768.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_183704_10

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8981..9709
DNA (729bp) protein (243aa)
Short-chain dehydrogenase n=1 Tax=uncultured microorganism RepID=C7BC75_9ZZZZ
Short-chain dehydrogenase {ECO:0000313|EMBL:ACT20891.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
short-chain dehydrogenase/reductase SDR
H2-16-all-fractions_k255_183704_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9706..10131
DNA (426bp) protein (142aa)
dihydroneopterin aldolase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B241
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:AGH50770.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_183704_12
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10339..10998
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C325E
TonB-like protein {ECO:0000313|EMBL:EAT09626.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
energy transducer TonB
H2-16-all-fractions_k255_183704_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11044..11829
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035C37B7
Biopolymer transport protein ExbB {ECO:0000313|EMBL:GAO39105.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
exbB; biopolymer transport protein ExbB
H2-16-all-fractions_k255_183704_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11897..12382
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037071F9
Uncharacterized protein {ECO:0000313|EMBL:AHE57306.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
biopolymer transport protein ExbD/TolR
H2-16-all-fractions_k255_183704_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12395..12829
DNA (435bp) protein (145aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2H6_SPHWW
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABQ66492.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_183704_16
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12938..13363
DNA (426bp) protein (142aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2H6_SPHWW
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABQ66492.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_183704_17
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13529..14896
DNA (1368bp) protein (456aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157 2.7.7.23)
N-acetylglucosamine-1-phosphate uridyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8C7
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
H2-16-all-fractions_k255_183704_18
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14897..16720
DNA (1824bp) protein (608aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
UPI0003D67629 related cluster n=1 Tax=unknown RepID=UPI0003D67629
glucosamine--fructose-6-phosphate aminotransferase
H2-16-all-fractions_k255_183704_19
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16798..17676
DNA (879bp) protein (293aa)
phytanoyl-CoA dioxygenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3A5
Uncharacterized protein {ECO:0000313|EMBL:KJB93101.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
phytanoyl-CoA dioxygenase
H2-16-all-fractions_k255_183704_20
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17673..18692)
DNA (1020bp) protein (340aa)
Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV95_SPHAL
LysR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
H2-16-all-fractions_k255_183704_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18710..19039
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZL0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80662.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
H2-16-all-fractions_k255_183704_22
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19124..19495
DNA (372bp) protein (124aa)
UPI0003D04656 related cluster n=1 Tax=unknown RepID=UPI0003D04656
Aldehyde-activating protein {ECO:0000313|EMBL:ESZ88582.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
glutathione-dependent formaldehyde-activating protein
H2-16-all-fractions_k255_183704_23
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19518..20546
DNA (1029bp) protein (343aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
alanine racemase (EC:5.1.1.1)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000374AD48
H2-16-all-fractions_k255_183704_24
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20425..21192)
DNA (768bp) protein (256aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
endonuclease III n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B64A
endonuclease III
H2-16-all-fractions_k255_183704_25
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21189..22271)
DNA (1083bp) protein (361aa)
Aminotransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM3_KORVE
Putative aminotransferase {ECO:0000313|EMBL:GAO38783.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
aminotransferase
H2-16-all-fractions_k255_183704_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22268..23539)
DNA (1272bp) protein (424aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM4_KORVE
Putative amino acid transporter {ECO:0000313|EMBL:GAO38784.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
amino acid transporter
H2-16-all-fractions_k255_183704_27
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23605..24321)
DNA (717bp) protein (239aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPH0_SPHAL
dihydrodipicolinate reductase
H2-16-all-fractions_k255_183704_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24379..24819)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488B1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD24908.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
H2-16-all-fractions_k255_183704_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24957..25706)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXF2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO39715.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_183704_30
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

25733..26458
DNA (726bp) protein (242aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
NAD-dependent protein deacylase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0Z0_9SPHN
NAD-dependent deacetylase
Displaying items 1-30 of 110 in total

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