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H2-16-all-fractions_k255_309881

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_309881_1
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1014
DNA (1014bp) protein (338aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
valyl-tRNA synthetase (EC:6.1.1.9)
UPI0003D62922 related cluster n=1 Tax=unknown RepID=UPI0003D62922
H2-16-all-fractions_k255_309881_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1120..2586
DNA (1467bp) protein (489aa)
Na+-driven multidrug efflux pump n=1 Tax=alpha proteobacterium JLT2015 RepID=M2T925_9PROT
MatE efflux family protein {ECO:0000313|EMBL:GAO39549.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
multidrug transporter MatE
H2-16-all-fractions_k255_309881_3
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2616..3608
DNA (993bp) protein (331aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hemB; porphobilinogen synthase (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B48336
H2-16-all-fractions_k255_309881_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3605..4102)
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO39556.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_309881_5
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4320..5597
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MXY3_PSEAI
int; phage integrase
Tax=BJP_IG2158_Rhodobacterales_64_37
H2-16-all-fractions_k255_309881_6
unknown

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5968..6144
DNA (177bp) protein (59aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_7
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6257..6583
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Xylella fastidiosa RepID=Q9PFM5_XYLFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE34943.1}; TaxID=1214121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa 32.;"
H2-16-all-fractions_k255_309881_8
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6762..8387
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL12 RepID=UPI000363F159
Uncharacterized protein {ECO:0000313|EMBL:CCD97738.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
H2-16-all-fractions_k255_309881_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8697..9410
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JGH4_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EIK51564.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri TS44.;"
hypothetical protein
H2-16-all-fractions_k255_309881_10
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9478..9867
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Xylella fastidiosa RepID=Q3R083_XYLFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAO13970.1}; TaxID=155919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa Dixon.;"
H2-16-all-fractions_k255_309881_11
unknown

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9867..10235
DNA (369bp) protein (123aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_12
unknown

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10232..10378
DNA (147bp) protein (49aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_13
unknown

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10383..10652
DNA (270bp) protein (90aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_14
unknown

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11280..11810
DNA (531bp) protein (177aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_15
unknown

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comp(11807..11968)
DNA (162bp) protein (54aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_16
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12053..12988)
DNA (936bp) protein (312aa)
Modification methylase RsrI; Short=M.RsrI;; EC=2.1.1.72;; Adenine-specific methyltransferase RsrI; TaxID=1063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides).;"
Modification methylase RsrI n=1 Tax=Rhodobacter sphaeroides RepID=MTR1_RHOSH
DNA-methyltransferase
H2-16-all-fractions_k255_309881_17
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13095..13940)
DNA (846bp) protein (282aa)
Type-2 restriction enzyme RsrI; Short=R.RsrI;; EC=3.1.21.4;; Endonuclease RsrI; Type II restriction enzyme RsrI; TaxID=1063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides).;"
Type-2 restriction enzyme RsrI n=1 Tax=Rhodobacter sphaeroides RepID=T2R1_RHOSH
Type II restriction enzyme EcoRI
H2-16-all-fractions_k255_309881_18
unknown

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comp(14305..14478)
DNA (174bp) protein (58aa)
hypothetical protein
H2-16-all-fractions_k255_309881_19
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14715..14969
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GKT1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB04406.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
H2-16-all-fractions_k255_309881_20
unknown

Not on your lists

15014..15367
DNA (354bp) protein (118aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15291..15632)
DNA (342bp) protein (114aa)
UPI0003CFCCC1 related cluster n=1 Tax=unknown RepID=UPI0003CFCCC1
Membrane protein {ECO:0000313|EMBL:KHA65388.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
membrane protein
H2-16-all-fractions_k255_309881_22
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15736..16986)
DNA (1251bp) protein (417aa)
succinylarginine dihydrolase (EC:3.5.3.23)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
N-succinylarginine dihydrolase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZL3_9SPHN
H2-16-all-fractions_k255_309881_23
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(16983..17999)
DNA (1017bp) protein (339aa)
Arginine N-succinyltransferase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C9U7_9SPHN
Arginine N-succinyltransferase {ECO:0000313|EMBL:KIY10207.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
arginine N-succinyltransferase
H2-16-all-fractions_k255_309881_24
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(17996..19204)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RX29_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KIY10208.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
H2-16-all-fractions_k255_309881_25
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19247..20647)
DNA (1401bp) protein (467aa)
Exopolyphosphatase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H1D7_9SPHN
Exopolyphosphatase {ECO:0000313|EMBL:EZP73364.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
Ppx/GppA phosphatase
H2-16-all-fractions_k255_309881_26
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20699..22864)
DNA (2166bp) protein (722aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
polyphosphate kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EB1
H2-16-all-fractions_k255_309881_27
unknown

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22999..23346
DNA (348bp) protein (116aa)

This feature has no annotations

H2-16-all-fractions_k255_309881_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23434..23802
DNA (369bp) protein (123aa)
Response regulator receiver domain protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DY83_9RHOB
Response regulator receiver protein {ECO:0000313|EMBL:KFC69279.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
response regulator receiver protein
H2-16-all-fractions_k255_309881_29
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23807..24280)
DNA (474bp) protein (158aa)
RNA pyrophosphohydrolase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CXW2_SPHYA
nudH; putative (di)nucleoside polyphosphate hydrolase
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
H2-16-all-fractions_k255_309881_30
unknown

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comp(24277..24432)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying items 1-30 of 83 in total

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