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H2-16-all-fractions_k255_1202857

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_1202857_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..714
DNA (714bp) protein (238aa)
RNA polymerase sigma factor RpoH n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKL7_9SPHN
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
rpoH; RNA polymerase sigma-32 factor
H2-16-all-fractions_k255_1202857_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(711..1742)
DNA (1032bp) protein (344aa)
ribonuclease n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288E48C
ribonuclease
Ribonuclease {ECO:0000313|EMBL:AIT06596.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H2-16-all-fractions_k255_1202857_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1918..3945
DNA (2028bp) protein (676aa)
elongation factor EF-G (EC:3.6.5.3)
elongation factor G n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BE68
Elongation factor G {ECO:0000313|EMBL:GAO40798.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_1202857_4
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4004..5497
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00038083D4
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
H2-16-all-fractions_k255_1202857_5
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5541..6845
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035E549A
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32248.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
H2-16-all-fractions_k255_1202857_6
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6829..7704)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B44D49
Uncharacterized protein {ECO:0000313|EMBL:KGE03985.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
hypothetical protein
H2-16-all-fractions_k255_1202857_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7735..8538)
DNA (804bp) protein (268aa)
haloacid dehalogenase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037E10E4
HAD-superfamily hydrolase
Putative hydrolase protein, HAD superfamily {ECO:0000313|EMBL:ACE89901.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
H2-16-all-fractions_k255_1202857_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8535..9332)
DNA (798bp) protein (266aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1Q6_9SPHN
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000313|EMBL:KKC24727.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
H2-16-all-fractions_k255_1202857_9
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9329..10306)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037B7700
Arabinose 5-phosphate isomerase {ECO:0000313|EMBL:KIL99763.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
putative sugar phosphate isomerase involved in capsule formation
H2-16-all-fractions_k255_1202857_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10395..11711
DNA (1317bp) protein (439aa)
Sodium:dicarboxylate symporter n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SBM1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE54526.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
sodium:dicarboxylate symporter
H2-16-all-fractions_k255_1202857_11
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11721..12983)
DNA (1263bp) protein (421aa)
peptidase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD181
Uncharacterized protein {ECO:0000313|EMBL:AHE54525.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
twin-arginine translocation pathway signal
H2-16-all-fractions_k255_1202857_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13050..14336
DNA (1287bp) protein (429aa)
Bcr/CflA subfamily drug resistance transporter n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZH2_9SPHN
Bcr/CflA subfamily drug resistance transporter
Bcr/CflA subfamily drug resistance transporter {ECO:0000313|EMBL:AGH49140.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1202857_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14391..15287)
DNA (897bp) protein (299aa)
recombinase RecA n=1 Tax=Sphingobium xenophagum RepID=UPI00031C69D6
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
recA; recombination protein RecA
Displaying 13 items

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