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H2-16-all-fractions_k255_1364077

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_1364077_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..257)
DNA (255bp) protein (85aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PL11_9RHOB
H2-16-all-fractions_k255_1364077_2
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275..472)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H424_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV31819.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
hypothetical protein
H2-16-all-fractions_k255_1364077_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(483..1775)
DNA (1293bp) protein (431aa)
isocitrate lyase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E9072C
Isocitrate lyase {ECO:0000313|EMBL:GAO40370.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
isocitrate lyase
H2-16-all-fractions_k255_1364077_4
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

1901..3316
DNA (1416bp) protein (472aa)
Predicted transcriptional regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAM0_PHEZH
DNA-binding protein {ECO:0000313|EMBL:KIY12813.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
transcriptional regulator
H2-16-all-fractions_k255_1364077_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3313..4224)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUQ3_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03988.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
H2-16-all-fractions_k255_1364077_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4288..5355
DNA (1068bp) protein (356aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00281};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00281};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Sphingomonas wittichii RepID=UPI0002E22E99
H2-16-all-fractions_k255_1364077_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5352..7706
DNA (2355bp) protein (785aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S567_9SPHN
H2-16-all-fractions_k255_1364077_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7683..8384)
DNA (702bp) protein (234aa)
glycerol acyltransferase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AAE882
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ABQ69361.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_1364077_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8384..8920)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000377CD39
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50632.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1364077_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8917..9786)
DNA (870bp) protein (290aa)
cell division protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A76F
Putative cell division protein {ECO:0000313|EMBL:GAO40202.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
cell division protein
H2-16-all-fractions_k255_1364077_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9786..10550)
DNA (765bp) protein (255aa)
cell division protein FtsE n=1 Tax=Sphingomonas melonis RepID=UPI00036133E2
Sphingomonas taxi strain 30a NODE_76, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26459.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cell division protein FtsE
H2-16-all-fractions_k255_1364077_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10602..11447
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0L6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49535.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1364077_13
unknown

Not on your lists

comp(11458..11679)
DNA (222bp) protein (74aa)

This feature has no annotations

H2-16-all-fractions_k255_1364077_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11965..14664)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG50_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82421.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
H2-16-all-fractions_k255_1364077_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14694..15521)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4F3_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA11008.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
H2-16-all-fractions_k255_1364077_16
unknown

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comp(15633..16220)
DNA (588bp) protein (196aa)

This feature has no annotations

H2-16-all-fractions_k255_1364077_17
unknown

Not on your lists

comp(16325..16837)
DNA (513bp) protein (171aa)

This feature has no annotations

H2-16-all-fractions_k255_1364077_18
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16972..17493)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNU3_SPHAL
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
H2-16-all-fractions_k255_1364077_19
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17692..19764
DNA (2073bp) protein (691aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037421F9
Putative penicillin-binding protein {ECO:0000313|EMBL:GAO40069.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
penicillin-binding protein
H2-16-all-fractions_k255_1364077_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19717..20454)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003602EC6
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AJP73587.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_1364077_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20411..20848)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036AA723
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07412.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H2-16-all-fractions_k255_1364077_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20880..21500
DNA (621bp) protein (207aa)
ankyrin n=1 Tax=Sphingomonas wittichii RepID=UPI000303FD42
ankyrin
Ankyrin {ECO:0000313|EMBL:ABQ69174.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_1364077_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21493..21978)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B40BFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49775.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1364077_24
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22060..22719)
DNA (660bp) protein (220aa)
Cell wall hydrolase SleB n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WLG5_9SPHN
Cell wall hydrolase SleB {ECO:0000313|EMBL:EIZ81138.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
cell wall hydrolase, SleB
H2-16-all-fractions_k255_1364077_25
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22894..23211)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B2FA58
Uncharacterized protein {ECO:0000313|EMBL:GAO40076.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_1364077_26
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23235..23699)
DNA (465bp) protein (155aa)
nitrogen regulatory protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028942F2
Uncharacterized protein {ECO:0000313|EMBL:AHE56697.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
H2-16-all-fractions_k255_1364077_27
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23762..24334)
DNA (573bp) protein (191aa)
30S ribosomal protein S30 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B35F04
SSU ribosomal protein S30P / sigma 54 modulation protein {ECO:0000313|EMBL:KGB54632.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
sigma 54 modulation protein/ribosomal protein S30EA
H2-16-all-fractions_k255_1364077_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24397..25035)
DNA (639bp) protein (213aa)
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AKH43327.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AKH43327.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
DNA polymerase III subunit epsilon n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B738CA
DNA polymerase III subunit epsilon
H2-16-all-fractions_k255_1364077_29
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25104..25697)
DNA (594bp) protein (198aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
dephospho-CoA kinase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD04C
dephospho-CoA kinase
H2-16-all-fractions_k255_1364077_30
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25694..26227)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030D1229
nucleotide-binding protein
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying items 1-30 of 33 in total

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