ggKbase home page

H2-16-all-fractions_k255_2321582

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_2321582_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..464
DNA (462bp) protein (154aa)
ubiquinone biosynthesis protein UbiH n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B8B3
ubiquinone biosynthesis protein UbiH
Uncharacterized protein {ECO:0000313|EMBL:AHE56791.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
H2-16-all-fractions_k255_2321582_2
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(465..1100)
DNA (636bp) protein (212aa)
ATP-dependent protease n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B34C1A
peptidase S16, lon domain-containing protein
ATP-dependent protease {ECO:0000313|EMBL:KKC26258.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
H2-16-all-fractions_k255_2321582_3
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1097..2002)
DNA (906bp) protein (302aa)
Thioredoxin n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CNI5_SPHYA
Thioredoxin-like protein {ECO:0000313|EMBL:KGB59241.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
thioredoxin-like protein
H2-16-all-fractions_k255_2321582_4
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2343..2876
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287D625
Uncharacterized protein {ECO:0000313|EMBL:KEY99838.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;"
hypothetical protein
H2-16-all-fractions_k255_2321582_5
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2951..4246
DNA (1296bp) protein (432aa)
site-specific DNA-methyltransferase (cytosine-specific) (EC:2.1.1.37)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EIM8_AMPQE
Tax=BJP_S1_SUB10_Methylophilales_55_32
H2-16-all-fractions_k255_2321582_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4648..6318)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=N4WCB1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EXL01683.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
H2-16-all-fractions_k255_2321582_7
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6344..8182)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3GB07_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EXJ13584.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
hypothetical protein
H2-16-all-fractions_k255_2321582_8
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8179..11343)
DNA (3165bp) protein (1055aa)
DNA helicase n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KV97_RHOSK
Superfamily II DNA and RNA helicase {ECO:0000313|EMBL:EYD74391.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
DNA helicase
H2-16-all-fractions_k255_2321582_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11340..13568)
DNA (2229bp) protein (743aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PE30_9DELT
hypothetical protein
H2-16-all-fractions_k255_2321582_10
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13688..13879
DNA (192bp) protein (64aa)
UPI0003D3EAE7 related cluster n=1 Tax=unknown RepID=UPI0003D3EAE7
Uncharacterized protein {ECO:0000313|EMBL:EZP74905.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
excisionase
H2-16-all-fractions_k255_2321582_11
unknown

Not on your lists

13917..14252
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037814BF
H2-16-all-fractions_k255_2321582_12
unknown

Not on your lists

comp(14420..14539)
DNA (120bp) protein (40aa)

This feature has no annotations

H2-16-all-fractions_k255_2321582_13
unknown

Not on your lists

comp(14734..15468)
DNA (735bp) protein (245aa)

This feature has no annotations

H2-16-all-fractions_k255_2321582_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15650..16396
DNA (747bp) protein (249aa)
Serine/threonine protein phosphatase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNU4_9FIRM
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CCY98627.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
serine/threonine protein phosphatase
H2-16-all-fractions_k255_2321582_15
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16425..17459
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y6P5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EZP74900.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
H2-16-all-fractions_k255_2321582_16
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17519..18232
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G4L5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98615.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
H2-16-all-fractions_k255_2321582_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18996..20561)
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KNI6_METEX
Putative uncharacterized protein {ECO:0000313|EMBL:EHP90916.1}; Flags: Precursor;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
H2-16-all-fractions_k255_2321582_18
unknown

Not on your lists

comp(20588..21478)
DNA (891bp) protein (297aa)

This feature has no annotations

H2-16-all-fractions_k255_2321582_19
unknown

Not on your lists

21800..22018
DNA (219bp) protein (73aa)

This feature has no annotations

H2-16-all-fractions_k255_2321582_20
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22436..23191)
DNA (756bp) protein (252aa)
hypothetical protein SMAC_09816, partial n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) RepID=UPI0001BF5AAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50227.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_2321582_21
unknown

Not on your lists

comp(23245..23433)
DNA (189bp) protein (63aa)

This feature has no annotations

H2-16-all-fractions_k255_2321582_22
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23523..24809)
DNA (1287bp) protein (429aa)
Phage integrase n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28N95_JANSC
Phage integrase {ECO:0000313|EMBL:KGB52647.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
phage integrase
H2-16-all-fractions_k255_2321582_23
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25303..25827
DNA (525bp) protein (175aa)
Ferritin Dps family protein (EC:1.16.-.-)
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI0003777275
DNA-binding protein {ECO:0000313|EMBL:KGD86523.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
H2-16-all-fractions_k255_2321582_24
unknown

Not on your lists

25873..26019
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 24 items

View Taxonomy