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H2-16-all-fractions_k255_2655305

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_2655305_1
unknown

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

H2-16-all-fractions_k255_2655305_2
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(250..456)
DNA (207bp) protein (69aa)
Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GT29_SPHAL
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABF53193.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
H2-16-all-fractions_k255_2655305_3
unknown

Not on your lists

820..1320
DNA (501bp) protein (167aa)

This feature has no annotations

H2-16-all-fractions_k255_2655305_4
unknown

Not on your lists

comp(1419..2699)
DNA (1281bp) protein (427aa)
hypothetical protein
H2-16-all-fractions_k255_2655305_5
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2668..2952)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VH45_PSEU5
Uncharacterized protein {ECO:0000313|EMBL:AJR23361.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
H2-16-all-fractions_k255_2655305_6
unknown

Not on your lists

comp(3056..3427)
DNA (372bp) protein (124aa)

This feature has no annotations

H2-16-all-fractions_k255_2655305_7
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3618..4406
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Rheinheimera sp. A13L RepID=F7NU19_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFZ31512.1}; TaxID=435908 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.;"
hypothetical protein
H2-16-all-fractions_k255_2655305_8
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4414..4725)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B326BA
Uncharacterized protein {ECO:0000313|EMBL:AHE53610.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
H2-16-all-fractions_k255_2655305_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4837..5409)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GQ92_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02163.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
H2-16-all-fractions_k255_2655305_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5444..6019)
DNA (576bp) protein (192aa)
UPF0301 protein G432_16500 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7W1_9SPHN
hypothetical protein
UPF0301 protein TS85_06365 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_2655305_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6123..6611
DNA (489bp) protein (163aa)
Putative peroxiredoxin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZSQ9_9SPHN
Putative peroxiredoxin {ECO:0000313|EMBL:GAD48389.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
alkyl hydroperoxide reductase
H2-16-all-fractions_k255_2655305_12
unknown

Not on your lists

6725..7156
DNA (432bp) protein (144aa)

This feature has no annotations

H2-16-all-fractions_k255_2655305_13
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7194..7949)
DNA (756bp) protein (252aa)
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4A5_9SPHN
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:KGB52834.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
alpha/beta hydrolase
H2-16-all-fractions_k255_2655305_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7946..8392)
DNA (447bp) protein (149aa)
aldehyde-activating protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003047FF4
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:ABQ69021.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_2655305_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8440..9447
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S195_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48708.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_2655305_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9448..10110
DNA (663bp) protein (221aa)
PKHD-type hydroxylase SCH01S_48_01170 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
PKHD-type hydroxylase G432_04900 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SDI2_9SPHN
putative hydroxylase
H2-16-all-fractions_k255_2655305_17
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10113..11141)
DNA (1029bp) protein (343aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIC4_9SPHN
asd; aspartate-semialdehyde dehydrogenase
H2-16-all-fractions_k255_2655305_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11234..13447
DNA (2214bp) protein (738aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00037E16B0
putative peptidase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_2655305_19
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13444..14634)
DNA (1191bp) protein (397aa)
Methyltransferase type 12 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VN80_CAUST
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ADG11953.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
H2-16-all-fractions_k255_2655305_20
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14776..15597
DNA (822bp) protein (274aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002899005
Uncharacterized protein {ECO:0000313|EMBL:GAO38753.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_2655305_21
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15594..17804)
DNA (2211bp) protein (737aa)
Peptidase S9B dipeptidylpeptidase IV domain protein n=2 Tax=Zymomonas mobilis RepID=Q5NMM8_ZYMMO
peptidase S9B dipeptidylpeptidase IV domain-containing protein
Peptidase S9B dipeptidylpeptidase IV domain protein {ECO:0000313|EMBL:AAV90032.2}; Flags: Precursor;; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).;"
H2-16-all-fractions_k255_2655305_22
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17852..19666)
DNA (1815bp) protein (605aa)
UPI0003D021E4 related cluster n=1 Tax=unknown RepID=UPI0003D021E4
Uncharacterized protein {ECO:0000313|EMBL:GAO38660.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_2655305_23
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists


comp(19688..20119)
DNA (432bp) protein (144aa)
50S ribosomal protein L19 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003815969
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
rplS; 50S ribosomal protein L19
Displaying 23 items

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