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H2-16-all-fractions_k255_4282917

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_4282917_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..150
DNA (150bp) protein (50aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
elongation factor 4 n=2 Tax=Bacteria RepID=UPI0003B594EB
GTP-binding protein LepA
H2-16-all-fractions_k255_4282917_2
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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339..650
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A472_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL26446.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
H2-16-all-fractions_k255_4282917_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(742..1041)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO39850.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_4282917_4
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1038..1838)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9A2_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC63739.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
H2-16-all-fractions_k255_4282917_5
unknown

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comp(2464..2817)
DNA (354bp) protein (118aa)

This feature has no annotations

H2-16-all-fractions_k255_4282917_6
unknown

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comp(2981..3352)
DNA (372bp) protein (124aa)

This feature has no annotations

H2-16-all-fractions_k255_4282917_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3537..5936
DNA (2400bp) protein (800aa)
PAS domain S-box protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7Q2_9BRAD
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:GAO38396.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
PAS/PAC sensor hybrid histidine kinase
H2-16-all-fractions_k255_4282917_8
unknown

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5990..6274
DNA (285bp) protein (95aa)

This feature has no annotations

H2-16-all-fractions_k255_4282917_9
unknown

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6345..6569
DNA (225bp) protein (75aa)

This feature has no annotations

H2-16-all-fractions_k255_4282917_10
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6669..7724
DNA (1056bp) protein (352aa)
Exo-alpha-(1->5)-L-arabinofuranosidase {ECO:0000256|PIRNR:PIRNR026534}; EC=3.2.1.- {ECO:0000256|PIRNR:PIRNR026534};; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
Exo-alpha-(1->5)-L-arabinofuranosidase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV65_SPHAL
glycoside hydrolase
H2-16-all-fractions_k255_4282917_11
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7717..8877)
DNA (1161bp) protein (387aa)
UPI0003CF586A related cluster n=1 Tax=unknown RepID=UPI0003CF586A
Beta-glucosidase {ECO:0000313|EMBL:ESW83190.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
H2-16-all-fractions_k255_4282917_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9038..10126)
DNA (1089bp) protein (363aa)
inorganic phosphate transporter n=1 Tax=Sphingomonas elodea RepID=UPI0002630708
Inorganic phosphate transporter {ECO:0000313|EMBL:AHE51837.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
pit; Putative low-affinity inorganic phosphate transporter
H2-16-all-fractions_k255_4282917_13
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10126..10767)
DNA (642bp) protein (214aa)
phosphate transport regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630707
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_4282917_14
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10854..12191)
DNA (1338bp) protein (446aa)
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EU89_SPHCR
Osmosensitive K+ channel signal transduction histidine kinase {ECO:0000313|EMBL:KFG89774.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
osmosensitive K+ channel signal transduction histidine kinase
H2-16-all-fractions_k255_4282917_15
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12318..14237
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030072B6
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
Low affinity potassium transport system protein kup
H2-16-all-fractions_k255_4282917_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14242..14859)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037CDB64
Putative two-component response regulator {ECO:0000313|EMBL:GAO39232.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
two component LuxR family transcriptional regulator
H2-16-all-fractions_k255_4282917_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14856..16439)
DNA (1584bp) protein (528aa)
Putative signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8Z1_NOVAD
Two-component system sensor kinase {ECO:0000313|EMBL:GAO53961.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
signal transduction histidine kinase
H2-16-all-fractions_k255_4282917_18
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16628..18964)
DNA (2337bp) protein (779aa)
putative signal transduction protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489FEC
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:AGH49304.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_4282917_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19134..20306
DNA (1173bp) protein (391aa)
histidine kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489F6C
signal transduction histidine kinase LytS
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:AGH50025.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_4282917_20
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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20306..21109
DNA (804bp) protein (268aa)
LytTR family two component transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6A8_9SPHN
LytTR family two component transcriptional regulator
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:AGH50024.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_4282917_21
unknown

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21212..21535
DNA (324bp) protein (108aa)

This feature has no annotations

H2-16-all-fractions_k255_4282917_22
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21545..22552)
DNA (1008bp) protein (336aa)
ATPase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7B95C
Phosphate regulon two-component histidine kinase PhoR {ECO:0000313|EMBL:GAO39074.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ATPase
H2-16-all-fractions_k255_4282917_23
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22673..24046)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D545_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83525.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
H2-16-all-fractions_k255_4282917_24
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24334..25353
DNA (1020bp) protein (340aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57195
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
pstS; phosphate ABC transporter substrate-binding protein PstS
H2-16-all-fractions_k255_4282917_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25412..26104)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCA7_SPHWW
Chemotaxis protein CheY {ECO:0000313|EMBL:AHE53819.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
two component transcriptional regulator
H2-16-all-fractions_k255_4282917_26
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26108..26797)
DNA (690bp) protein (230aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0Q5_9SPHN
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
phosphate uptake regulator PhoU
H2-16-all-fractions_k255_4282917_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26810..27622)
DNA (813bp) protein (271aa)
Phosphate import ATP-binding protein PstB {ECO:0000255|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000255|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000255|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000255|HAMAP-Rule:MF_01702}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Phosphate import ATP-binding protein PstB n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=PSTB_RHOPS
pstB; phosphate transporter ATP-binding protein
H2-16-all-fractions_k255_4282917_28
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27615..28457)
DNA (843bp) protein (281aa)
phosphate transporter permease subunit PtsA n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4E5A2
Phosphate ABC transporter permease {ECO:0000313|EMBL:KAK46212.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
pstA-2; phosphate ABC transporter permease protein PstA 2
H2-16-all-fractions_k255_4282917_29
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28459..29442)
DNA (984bp) protein (328aa)
phosphate ABC transporter permease n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B47061
Phosphate transporter permease subunit PstC {ECO:0000313|EMBL:KAK46213.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
phosphate ABC transporter, permease protein PstC
H2-16-all-fractions_k255_4282917_30
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29439..30470)
DNA (1032bp) protein (344aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57195
phosphate ABC transporter periplasmic phosphate-binding protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Displaying items 1-30 of 40 in total

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