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H2-16-all-fractions_k255_5153564

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_5153564_1
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1259
DNA (1257bp) protein (419aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
lon; Lon protease (EC:3.4.21.53)
peptidase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B87B
H2-16-all-fractions_k255_5153564_2
Acetobacter malorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1266..1871)
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
ATP-dependent Clp protease ClpP n=2 Tax=Acetobacter aceti RepID=UPI00031F0D2D
clpP; Clp protease proteolytic subunit ClpP
H2-16-all-fractions_k255_5153564_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2059..2331
DNA (273bp) protein (91aa)
transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI000263065E
DNA-binding protein HU {ECO:0000313|EMBL:GAM02129.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
histone family protein DNA-binding protein
H2-16-all-fractions_k255_5153564_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2484..3194)
DNA (711bp) protein (237aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WI00_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE53951.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
cAMP-binding protein
H2-16-all-fractions_k255_5153564_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3274..3702)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MKS1_9SPHN
Histidine triad (HIT) protein {ECO:0000313|EMBL:KGB56526.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
histidine triad (HIT) protein
H2-16-all-fractions_k255_5153564_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3914..4963
DNA (1050bp) protein (350aa)
Glu/Leu/Phe/Val dehydrogenase, dimerisation region n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDG5_SPHWW
Putative leucine dehydrogenase {ECO:0000313|EMBL:GAO38674.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Glu/Leu/Phe/Val dehydrogenase
H2-16-all-fractions_k255_5153564_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4975..5691
DNA (717bp) protein (239aa)
Heme exporter protein CcmC n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDG7_SPHWW
heme exporter protein CcmC
Heme exporter protein CcmC {ECO:0000313|EMBL:ABQ70333.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_5153564_8
unknown

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5688..5816
DNA (129bp) protein (43aa)

This feature has no annotations

H2-16-all-fractions_k255_5153564_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5827..6267
DNA (441bp) protein (147aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQX8_9SPHN
Cytochrome c-type biogenesis protein CcmE {ECO:0000313|EMBL:AKH41874.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ccmE; Cytochrome c-type biogenesis protein CcmE
H2-16-all-fractions_k255_5153564_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6264..8198
DNA (1935bp) protein (645aa)
Cytochrome c assembly protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SB48_9SPHN
Cytochrome c biogenesis protein CcmF {ECO:0000313|EMBL:GAO38670.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
cytochrome c assembly protein
H2-16-all-fractions_k255_5153564_11
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8195..8722
DNA (528bp) protein (176aa)
Periplasmic protein thiol--disulphide oxidoreductase DsbE n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDH0_SPHWW
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KKC24698.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
periplasmic protein thiol--disulfide oxidoreductase DsbE
H2-16-all-fractions_k255_5153564_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8719..9129
DNA (411bp) protein (137aa)
Cytochrome C biogenesis protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0A4_9SPHN
Cytochrome c biogenesis protein CcmH {ECO:0000313|EMBL:GAO38668.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
cytochrome C biogenesis protein
H2-16-all-fractions_k255_5153564_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9126..9746
DNA (621bp) protein (207aa)
Cytochrome c biogenesis factor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQJ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE54346.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
cytochrome c biogenesis factor
H2-16-all-fractions_k255_5153564_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9743..10843)
DNA (1101bp) protein (367aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
alanine dehydrogenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036D5083
alanine dehydrogenase
H2-16-all-fractions_k255_5153564_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10949..12958
DNA (2010bp) protein (670aa)
potassium transporter Kup n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037DE868
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
K+ potassium transporter
H2-16-all-fractions_k255_5153564_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12989..13552
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003797EAD
Uncharacterized protein {ECO:0000313|EMBL:GAO38995.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
photosystem reaction center subunit H
H2-16-all-fractions_k255_5153564_17
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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13537..14043
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D757_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KIY14299.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
H2-16-all-fractions_k255_5153564_18
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(14040..14540)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893DF
Uncharacterized protein {ECO:0000313|EMBL:KIY14298.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
H2-16-all-fractions_k255_5153564_19
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14749..15930)
DNA (1182bp) protein (394aa)
Saccharopine dehydrogenase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYI2_SPHCR
saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AEG49184.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
H2-16-all-fractions_k255_5153564_20
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15927..16148)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYI1_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG49183.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
H2-16-all-fractions_k255_5153564_21
unknown

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16772..17089
DNA (318bp) protein (106aa)

This feature has no annotations

H2-16-all-fractions_k255_5153564_22
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17086..17730
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6D350
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
H2-16-all-fractions_k255_5153564_23
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17734..18378
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289067E
Uncharacterized protein {ECO:0000313|EMBL:GAO40366.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_5153564_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18385..19557)
DNA (1173bp) protein (391aa)
cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase {ECO:0000313|EMBL:AIT06389.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AIT06389.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cystathionine beta-lyase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB0AB
H2-16-all-fractions_k255_5153564_25
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19624..19947)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GV95_DEIGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD26770.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
H2-16-all-fractions_k255_5153564_26
unknown

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comp(19974..20195)
DNA (222bp) protein (74aa)

This feature has no annotations

H2-16-all-fractions_k255_5153564_27
unknown

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comp(20319..20552)
DNA (234bp) protein (78aa)

This feature has no annotations

H2-16-all-fractions_k255_5153564_28
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20923..22245
DNA (1323bp) protein (441aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01570}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
prolyl-tRNA synthetase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003601271
H2-16-all-fractions_k255_5153564_29
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22242..23492
DNA (1251bp) protein (417aa)
ABC transporter substrate-binding protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HSE0_9SPHN
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EQB15992.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
lipoprotein releasing system transmembrane protein LolC/E family
H2-16-all-fractions_k255_5153564_30
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23485..24159
DNA (675bp) protein (225aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B64585
Displaying items 1-30 of 45 in total

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