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H2-16-all-fractions_k255_6175453

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_6175453_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..497)
DNA (495bp) protein (165aa)
NusA antitermination factor n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCZ8_SPHWW
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_6175453_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(497..1030)
DNA (534bp) protein (178aa)
ribosome maturation factor RimP n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B77B20
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_6175453_3
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1238..1774)
DNA (537bp) protein (179aa)
Transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2GJT1_9CAUL
Transcriptional regulator {ECO:0000313|EMBL:EJL30380.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
regulatory protein MarR
H2-16-all-fractions_k255_6175453_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1943..3895
DNA (1953bp) protein (651aa)
peptidase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003AA60C9
peptidase M13
Peptidase M13 {ECO:0000313|EMBL:AHX13865.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
H2-16-all-fractions_k255_6175453_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3911..4396)
DNA (486bp) protein (162aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZYP8_STAND
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ADH91017.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
H2-16-all-fractions_k255_6175453_6
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4393..5442)
DNA (1050bp) protein (350aa)
chalcone synthase (EC:2.3.1.74)
chalcone synthase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000382B2AC
Putative Type III polyketide synthase {ECO:0000313|EMBL:EIZ80055.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
H2-16-all-fractions_k255_6175453_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5501..6739
DNA (1239bp) protein (413aa)
glucose sorbosone dehydrogenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B36F8B
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:ENZ83370.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
glucose sorbosone dehydrogenase
H2-16-all-fractions_k255_6175453_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6724..7422)
DNA (699bp) protein (233aa)
tRNA (Guanine-N(7)-)-methyltransferase {ECO:0000313|EMBL:AKH43627.1}; EC=2.1.1.33 {ECO:0000313|EMBL:AKH43627.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INM2_9SPHN
trmB; tRNA (guanine-N(7)-)-methyltransferase
H2-16-all-fractions_k255_6175453_9
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7507..7953
DNA (447bp) protein (149aa)
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D21D9
Uncharacterized protein {ECO:0000313|EMBL:CCD98064.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
H2-16-all-fractions_k255_6175453_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7950..9299
DNA (1350bp) protein (450aa)
Putative glucose/sorbosone dehydrogenase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XY82_9PROT
Putative glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:EGY01777.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
glucose/sorbosone dehydrogenase
H2-16-all-fractions_k255_6175453_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9317..9784
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Rhizobium etli RepID=S5RSZ4_RHIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS20998.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
H2-16-all-fractions_k255_6175453_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9781..10995)
DNA (1215bp) protein (405aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
S-adenosylmethionine synthetase n=1 Tax=Sphingomonas elodea RepID=UPI000263131A
S-adenosylmethionine synthetase
H2-16-all-fractions_k255_6175453_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11054..12568)
DNA (1515bp) protein (505aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Apolipoprotein N-acyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RY23_9SPHN
apolipoprotein N-acyltransferase
H2-16-all-fractions_k255_6175453_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12669..13091
DNA (423bp) protein (141aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMI3_9GAMM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL88424.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glyoxalase/bleomycin resistance protein/dioxygenase
H2-16-all-fractions_k255_6175453_15
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13088..13969)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024892F4
Putative transporter {ECO:0000313|EMBL:GAO40792.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_6175453_16
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13969..14472)
DNA (504bp) protein (168aa)
rRNA maturation factor n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003660A77
rRNA maturation factor
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
H2-16-all-fractions_k255_6175453_17
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14472..15464)
DNA (993bp) protein (331aa)
PhoH family protein n=2 Tax=Sphingomonas wittichii RepID=A5V8Y1_SPHWW
PhoH {ECO:0000313|EMBL:KKC25164.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
PhoH family protein
H2-16-all-fractions_k255_6175453_18
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15464..16771)
DNA (1308bp) protein (436aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZU9_9SPHN
(dimethylallyl)adenosine tRNA methylthiotransferase
H2-16-all-fractions_k255_6175453_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16768..17514)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J569_9SPHN
Acyl-phosphate glycerol 3-phosphate acyltransferase {ECO:0000313|EMBL:KFD26428.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
phospholipid/glycerol acyltransferase
H2-16-all-fractions_k255_6175453_20
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17530..17952)
DNA (423bp) protein (141aa)
Ferric uptake regulation protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SBH1_9SPHN
ferric uptake regulation protein
Ferric uptake regulation protein {ECO:0000313|EMBL:AGH47987.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_6175453_21
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17996..18418)
DNA (423bp) protein (141aa)
Putative transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2WUG1_9SPHN
Putative MucR family transcriptional regulator {ECO:0000313|EMBL:GAO40784.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
MucR-family transcriptional regulator
H2-16-all-fractions_k255_6175453_22
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18541..19020)
DNA (480bp) protein (160aa)
acetyltransferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B77E9E
Putative acetyltransferase {ECO:0000313|EMBL:GAO40783.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ribosomal-protein-alanine acetyltransferase
H2-16-all-fractions_k255_6175453_23
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19020..19652)
DNA (633bp) protein (211aa)
Peptidase M22, glycoprotease n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0L2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE54480.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
peptidase M22, glycoprotease
H2-16-all-fractions_k255_6175453_24
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19683..20255)
DNA (573bp) protein (191aa)
Nitrogen-fixing NifU-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9P0_NOVAD
nitrogen-fixing NifU-like
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_6175453_25
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20287..20880)
DNA (594bp) protein (198aa)
cytochrome C n=1 Tax=Ponticaulis koreensis RepID=UPI0003B541BC
Putative cytochrome protein {ECO:0000313|EMBL:KCZ83100.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
hypothetical protein
H2-16-all-fractions_k255_6175453_26
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20877..21776)
DNA (900bp) protein (300aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3Z9_SPHWW
H2-16-all-fractions_k255_6175453_27
unknown

Not on your lists

comp(21776..22033)
DNA (258bp) protein (86aa)

This feature has no annotations

H2-16-all-fractions_k255_6175453_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22036..22812)
DNA (777bp) protein (259aa)
enoyl-CoA hydratase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00031D4D7A
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:GAO40758.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
short chain enoyl-CoA hydratase
H2-16-all-fractions_k255_6175453_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22809..23885)
DNA (1077bp) protein (359aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNL4_SPHAL
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:GAO40759.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
enoyl-CoA hydratase/isomerase
H2-16-all-fractions_k255_6175453_30
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23882..25024)
DNA (1143bp) protein (381aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0I733_9SPHN
Acyl-CoA dehydrogenase FadE {ECO:0000313|EMBL:GAO40760.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Displaying items 1-30 of 91 in total

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