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H2-16-all-fractions_k255_6499420

Search features with annotation key words

Displaying items 31-60 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_6499420_31
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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31947..32579
DNA (633bp) protein (211aa)
recombinase RecR n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B42FE6
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
recR; recombination protein RecR
H2-16-all-fractions_k255_6499420_32
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32592..32942
DNA (351bp) protein (117aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RTG7_ASTEC
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADU14788.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
H2-16-all-fractions_k255_6499420_33
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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32974..33522
DNA (549bp) protein (183aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
UPI0003D06B20 related cluster n=1 Tax=unknown RepID=UPI0003D06B20
def; peptide deformylase
H2-16-all-fractions_k255_6499420_34
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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33489..33896
DNA (408bp) protein (136aa)
Aromatic ring-cleaving dioxygenase-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVI7_SPHAL
aromatic ring-cleaving dioxygenase-like protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_6499420_35
unknown

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comp(33911..34384)
DNA (474bp) protein (158aa)

This feature has no annotations

H2-16-all-fractions_k255_6499420_36
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(34822..35211)
DNA (390bp) protein (130aa)
Ferredoxin n=1 Tax=Sphingobium japonicum BiD32 RepID=N1ML39_9SPHN
Ferredoxin {ECO:0000313|EMBL:CCW16327.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
H2-16-all-fractions_k255_6499420_37
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35370..36683
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2T7_SPHWW
DNA recombination protein RmuC {ECO:0000313|EMBL:GAO39066.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_6499420_38
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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36904..37665
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KI02_SHEWM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
H2-16-all-fractions_k255_6499420_39
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(37809..38606)
DNA (798bp) protein (266aa)
RNA methyltransferase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K7V5_9SPHN
RNA methyltransferase {ECO:0000313|EMBL:KKC25967.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
spoU; RNA methyltransferase
H2-16-all-fractions_k255_6499420_40
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(38606..38878)
DNA (273bp) protein (91aa)
HPr kinase n=1 Tax=Sphingobium baderi LL03 RepID=T0GTQ1_9SPHN
HPr kinase {ECO:0000313|EMBL:EQB03308.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
phosphotransferase system, phosphocarrier protein HPr
H2-16-all-fractions_k255_6499420_41
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38875..39282)
DNA (408bp) protein (136aa)
PTS system fructose subfamily transporter subunit IIA n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S066_9SPHN
PTS system fructose subfamily transporter subunit IIA
PTS system fructose subfamily transporter subunit IIA {ECO:0000313|EMBL:AGH48318.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_6499420_42
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39279..40217)
DNA (939bp) protein (313aa)
UPF0042 nucleotide-binding protein G432_02950 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SCC2_9SPHN
glmZ(sRNA)-inactivating NTPase
Nucleotide-binding protein G432_02950 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_6499420_43
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40217..40675)
DNA (459bp) protein (153aa)
HPr kinase/phosphorylase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RXN2_9SPHN
HPr kinase/phosphorylase
HPr kinase/phosphorylase {ECO:0000313|EMBL:AGH48316.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_6499420_44
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40672..42243)
DNA (1572bp) protein (524aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
histidine kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248930F
integral membrane sensor signal transduction histidine kinase
H2-16-all-fractions_k255_6499420_45
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42212..42922)
DNA (711bp) protein (237aa)
transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B66CCE
Transcriptional regulator {ECO:0000313|EMBL:KHA65094.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
transcriptional regulator
H2-16-all-fractions_k255_6499420_46
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43115..44752
DNA (1638bp) protein (546aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phosphoenolpyruvate carboxykinase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB061
phosphoenolpyruvate carboxykinase
H2-16-all-fractions_k255_6499420_47
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44795..45241
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRG8_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:GAO38665.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_6499420_48
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45238..47067)
DNA (1830bp) protein (610aa)
Twin-arginine translocation pathway signal n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX49_9SPHN
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ENY83025.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
protein of unknown function DUF885
H2-16-all-fractions_k255_6499420_49
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47087..47548)
DNA (462bp) protein (154aa)
membrane protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489315
putative modifier of protease activity
Membrane protein {ECO:0000313|EMBL:EPR15433.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
H2-16-all-fractions_k255_6499420_50
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47545..48519)
DNA (975bp) protein (325aa)
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB05D
Membrane protein {ECO:0000313|EMBL:EQB33350.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
protein QmcA
H2-16-all-fractions_k255_6499420_51
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48561..49391
DNA (831bp) protein (277aa)
citryl-CoA lyase n=1 Tax=Sphingomonas elodea RepID=UPI00026316F5
citryl-CoA lyase
Citryl-CoA lyase {ECO:0000313|EMBL:AJP71918.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_6499420_52
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49433..50905
DNA (1473bp) protein (491aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
inosine-5`-monophosphate dehydrogenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037F3839
guaB; IMP dehydrogenase
H2-16-all-fractions_k255_6499420_53
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50909..52084
DNA (1176bp) protein (392aa)
Fmu (Sun) domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3A8_SPHWW
Fmu (Sun) domain-containing protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:ABQ66774.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_6499420_54
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52110..52607
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003637F8C
TPR repeat-containing protein {ECO:0000313|EMBL:KHA65091.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
TPR repeat-containing protein
H2-16-all-fractions_k255_6499420_55
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(52604..53425)
DNA (822bp) protein (274aa)
ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1E7_9SPHN
H2-16-all-fractions_k255_6499420_56
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53422..54426)
DNA (1005bp) protein (335aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002EB71F2
H2-16-all-fractions_k255_6499420_57
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54456..55778)
DNA (1323bp) protein (441aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036CA9DC
PpiC-type peptidyl-prolyl cis-trans isomerase
H2-16-all-fractions_k255_6499420_58
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55893..58079)
DNA (2187bp) protein (729aa)
Organic solvent tolerance protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RXL8_9SPHN
organic solvent tolerance protein
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_6499420_59
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58279..59751
DNA (1473bp) protein (491aa)
leucyl aminopeptidase (EC:3.4.11.1)
leucyl aminopeptidase n=1 Tax=Sphingomonas wittichii RepID=UPI0003131C9A
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
H2-16-all-fractions_k255_6499420_60
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

59763..60200
DNA (438bp) protein (146aa)
DNA polymerase III subunit chi n=1 Tax=Sphingomonas elodea RepID=UPI0002630D46
DNA polymerase III subunit chi {ECO:0000313|EMBL:KIY11895.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
DNA polymerase III chi subunit, HolC
Displaying items 31-60 of 87 in total

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