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H2-16-all-fractions_k255_6499420_33

Organism: H2-16-all-fractions_metab_57

partial RP 27 / 55 MC: 3 BSCG 25 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 32974..33522

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 175.0
  • Bit_score: 243
  • Evalue 1.30e-61
UPI0003D06B20 related cluster n=1 Tax=unknown RepID=UPI0003D06B20 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 175.0
  • Bit_score: 242
  • Evalue 2.70e-61
def; peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 175.0
  • Bit_score: 238
  • Evalue 1.40e-60

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGGCCATTCGCCGCATCTATGAGACGCCCGACCCGGTCCTCCGGCAGATTTCCAAGCCGGTGGAGACGTTCGACAGCGTCCTGAAGACGCTCGTCGCCGACATGTTCGAGACAATGTACGAAGCCCCCGGCATCGGTCTTGCCGCGGTGCAGGTCGGCGTTCCGATCCGGCTCCTGGTCATCGACCTGCAGGAGCCTGAGGACGCCGAGGATCCCGAAAGCAAGACCGTCCGTGACCCGCGCGTGTTCATCAACCCCGAGATCCTGTGGCACTCGGACAGCGAGGTTCCCTACACCGAAGGCTGCCTGTCGGTGCCCGAGCAATATGCCGAGGTGATGCGGCCGGACAAAATCCGCGCCCGCTGGCGGGACGAGAAGGGTAAGGGCTATGAGGAAGAGATCGATGGCCTGCTCGCCGTCTGCCTCCAGCATGAGATGGACCATTTGAACGGCGTTCTGTTCATCGACCACCTCTCGCGCCTGAAACGCGACATGGTCCTCAAGAAACTCGCCAAATGGCGCAAGGAGCAGGGGTTGAAAGCAGCGTGA
PROTEIN sequence
Length: 183
MAIRRIYETPDPVLRQISKPVETFDSVLKTLVADMFETMYEAPGIGLAAVQVGVPIRLLVIDLQEPEDAEDPESKTVRDPRVFINPEILWHSDSEVPYTEGCLSVPEQYAEVMRPDKIRARWRDEKGKGYEEEIDGLLAVCLQHEMDHLNGVLFIDHLSRLKRDMVLKKLAKWRKEQGLKAA*