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H2-16-all-fractions_k255_7070118

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_7070118_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..696)
DNA (696bp) protein (232aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
tRNA (guanine-N1)-methyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003722382
tRNA (guanine-N1)-methyltransferase
H2-16-all-fractions_k255_7070118_2
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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734..1696
DNA (963bp) protein (321aa)
thioredoxin reductase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AB2BE1
Thioredoxin reductase {ECO:0000313|EMBL:KIY13528.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
thioredoxin reductase
H2-16-all-fractions_k255_7070118_3
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(1693..2184)
DNA (492bp) protein (164aa)
ribosome maturation factor RimM n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B3681C
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
rimM; ribosome maturation factor RimM
H2-16-all-fractions_k255_7070118_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2187..3008)
DNA (822bp) protein (274aa)
SSU ribosomal protein S16P n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPJ0_SPHAL
30S ribosomal protein S16
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
H2-16-all-fractions_k255_7070118_5
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(3033..4514)
DNA (1482bp) protein (494aa)
signal recognition particle n=1 Tax=Sphingomonas melonis RepID=UPI000362AC53
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
signal recognition particle protein
H2-16-all-fractions_k255_7070118_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4671..5072)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003158380
Uncharacterized protein {ECO:0000313|EMBL:GAO39165.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_7070118_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5177..6112
DNA (936bp) protein (312aa)
alpha-L-glutamate ligase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D20
alpha-L-glutamate ligase
Alpha-L-glutamate ligase {ECO:0000313|EMBL:AIT07739.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H2-16-all-fractions_k255_7070118_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6109..7158
DNA (1050bp) protein (350aa)
alkanesulfonate monooxygenase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287EEF3
Putative FMNH2-dependent monooxygenase {ECO:0000313|EMBL:GAO37948.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
alkanesulfonate monooxygenase
H2-16-all-fractions_k255_7070118_9
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7164..7964
DNA (801bp) protein (267aa)
Diaminopimelate epimerase {ECO:0000255|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000255|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00197};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
Diaminopimelate epimerase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=DAPF_SPHAL
dapF; diaminopimelate epimerase
H2-16-all-fractions_k255_7070118_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7961..8236
DNA (276bp) protein (92aa)
2-methylthioadenine synthase n=1 Tax=Sphingobium xenophagum RepID=UPI000376170D
MiaB-like enzyme
MiaB-like enzyme {ECO:0000313|EMBL:BAK67021.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
H2-16-all-fractions_k255_7070118_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8353..9213
DNA (861bp) protein (287aa)
2-methylthioadenine synthase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B313FD
Putative MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:GAO38006.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
MiaB-like tRNA modifying protein
H2-16-all-fractions_k255_7070118_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9210..10127
DNA (918bp) protein (306aa)
cell division protein FtsY n=1 Tax=Sphingomonas wittichii RepID=UPI00030659C4
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
signal recognition particle-docking protein FtsY
H2-16-all-fractions_k255_7070118_13
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10124..10738
DNA (615bp) protein (205aa)
Probable intracellular septation protein A n=1 Tax=Sphingomonas sp. S17 RepID=F3WV12_9SPHN
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
intracellular septation protein A
H2-16-all-fractions_k255_7070118_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10735..11673
DNA (939bp) protein (313aa)
Uncharacterized ABC transporter ATP-binding protein yadG n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVC1_BREDI
Uncharacterized ABC transporter ATP-binding protein yadG {ECO:0000313|EMBL:EGF96550.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ABC transporter
H2-16-all-fractions_k255_7070118_15
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11670..12431
DNA (762bp) protein (254aa)
ABC-2 type transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVC0_BREDI
ABC transporter
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
H2-16-all-fractions_k255_7070118_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12421..13077)
DNA (657bp) protein (219aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414, ECO:0000313|EMBL:AJP71958.1}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
superoxide dismutase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003673328
superoxide dismutase
H2-16-all-fractions_k255_7070118_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13250..13825
DNA (576bp) protein (192aa)
Membrane-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VAH0_SPHWW
hypothetical protein
Membrane-like protein {ECO:0000313|EMBL:ABQ69286.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_7070118_18
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13837..14391)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D1I1_CAUCE
TPR domain protein, putative component of TonB system {ECO:0000313|EMBL:KFE72508.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
H2-16-all-fractions_k255_7070118_19
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14491..15537)
DNA (1047bp) protein (349aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VAH2_SPHWW
sigma-54 dependent trancsriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ69288.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_7070118_20
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15727..16395
DNA (669bp) protein (223aa)
phage-shock protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003704A4A
Phage shock protein A {ECO:0000313|EMBL:GAO38000.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
phage shock protein PspA
H2-16-all-fractions_k255_7070118_21
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16396..16659
DNA (264bp) protein (88aa)
UPI0003D0569B related cluster n=1 Tax=unknown RepID=UPI0003D0569B
Uncharacterized protein {ECO:0000313|EMBL:ESZ86809.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
phage-shock protein
H2-16-all-fractions_k255_7070118_22
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16661..17146
DNA (486bp) protein (162aa)
Phage-shock protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IVZ5_9SPHN
Phage-shock protein {ECO:0000313|EMBL:EQB13849.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
phage shock protein C
H2-16-all-fractions_k255_7070118_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17146..17451
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQB3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH44288.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
H2-16-all-fractions_k255_7070118_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17505..17783
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6K7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83142.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
H2-16-all-fractions_k255_7070118_25
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17780..18058
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K326_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB30984.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
H2-16-all-fractions_k255_7070118_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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18055..18309
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B33E3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO37996.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_7070118_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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18329..18748
DNA (420bp) protein (140aa)
Fe-S metabolism associated SufE n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G964_NOVAD
Fe-S metabolism associated SufE
Fe-S metabolism associated SufE {ECO:0000313|EMBL:ABD25609.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
H2-16-all-fractions_k255_7070118_28
unknown

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18823..19236
DNA (414bp) protein (138aa)

This feature has no annotations

H2-16-all-fractions_k255_7070118_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19233..19685)
DNA (453bp) protein (151aa)
molecular chaperone DnaJ n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037F5F1A
molecular chaperone DnaJ
Uncharacterized protein {ECO:0000313|EMBL:GAO37993.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_7070118_30

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comp(20232..20918)
DNA (687bp) protein (229aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039CD307
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AIA16480.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
N-acetylmuramoyl-L-alanine amidase
Displaying items 1-30 of 38 in total

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