ggKbase home page

H2-16-all-fractions_k255_7557066

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_7557066_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..790
DNA (789bp) protein (263aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3R8_SPHWW
hrcA; heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_7557066_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

787..1338
DNA (552bp) protein (184aa)
molecular chaperone GrpE n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E4781A
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
molecular chaperone GrpE
H2-16-all-fractions_k255_7557066_3
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1298..3298)
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00030BE51E
Uncharacterized protein {ECO:0000313|EMBL:KEO88978.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
adenylate cyclase protein
H2-16-all-fractions_k255_7557066_4
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3359..4522)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
Sarcosine oxidase {ECO:0000313|EMBL:GAN00373.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
FAD dependent oxidoreductase
H2-16-all-fractions_k255_7557066_5
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4615..7221)
DNA (2607bp) protein (869aa)
TonB-dependent receptor n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1D9_SPHCR
TonB-dependent receptor {ECO:0000313|EMBL:AJR23452.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
TonB-dependent receptor
H2-16-all-fractions_k255_7557066_6
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7354..7809)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GRM1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB03302.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
H2-16-all-fractions_k255_7557066_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7947..8183
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035FD643
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
acyl carrier protein
H2-16-all-fractions_k255_7557066_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8288..9547
DNA (1260bp) protein (420aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHT7_9SPHN
H2-16-all-fractions_k255_7557066_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9544..10506
DNA (963bp) protein (321aa)
aminodeoxychorismate lyase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B40A55
Uncharacterized protein {ECO:0000313|EMBL:GAO39321.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
aminodeoxychorismate lyase
H2-16-all-fractions_k255_7557066_10
unknown

Not on your lists

10503..10832
DNA (330bp) protein (110aa)

This feature has no annotations

H2-16-all-fractions_k255_7557066_11
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10826..11041)
DNA (216bp) protein (72aa)
Cell wall-associated hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQB8_9SPHN
Cell wall-associated hydrolase {ECO:0000313|EMBL:KGB55276.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
cell wall-associated hydrolase
H2-16-all-fractions_k255_7557066_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11133..11513)
DNA (381bp) protein (127aa)
transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5C0C6
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABQ66469.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_7557066_13
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11634..12011)
DNA (378bp) protein (126aa)
Cytosol aminopeptidase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IUD3_9SPHN
Cytosol aminopeptidase {ECO:0000313|EMBL:EQB32455.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
putative M17 family peptidase
Displaying 13 items

View Taxonomy