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H2-16-all-fractions_k255_4713457_30

Organism: H2-16-all-fractions_metab_57

partial RP 27 / 55 MC: 3 BSCG 25 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(30119..30610)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000302D624 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 165.0
  • Bit_score: 187
  • Evalue 7.00e-45
RNA-binding protein Hfq {ECO:0000256|SAAS:SAAS00067493}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 163.0
  • Bit_score: 192
  • Evalue 4.00e-46
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 161.0
  • Bit_score: 188
  • Evalue 1.50e-45

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCAGCGCGATCGCTGAGCTTGCAGGATCACTTCCTGAACAGCGTCCGGCGGGCCAAACTGCCGGTCACGATCTTCCTCGTCAAAGGCGTCAAGCTGCAGGGCGTGGTGACCTGGTTCGACGCCTTTTCTCTGCTGTTGAGGCGAGAAGGCGCCTCCCAGTTGGTCTACAAGCATTCGGTTTCGACCATCATGCCGGCCGAACCGCCGAAGGATTTCGTCCCGACGGTCGCCGCTGTCGACGGCCCGAAAACGACGCTTCAGGACCTCTTCCTTGCAGCCTCGACACGCGAGGAGGAGCGGATGACCGTGTTCCTCGTCAACGGAGTCATGCTCCAGGGATCGGTCACCGGCTTCGATCAGTTCAGCCTCGTGCTTGAGCGCGGCGGCCAGATCCAGCTCGTGTACAAGCATGCCATCTCGACGCTGCAGCCTGCGCATCCGTTGAACCTCGGCCCGGACGAGGCGAGCGAAGGAGAATCTGAATCCTGA
PROTEIN sequence
Length: 164
MAARSLSLQDHFLNSVRRAKLPVTIFLVKGVKLQGVVTWFDAFSLLLRREGASQLVYKHSVSTIMPAEPPKDFVPTVAAVDGPKTTLQDLFLAASTREEERMTVFLVNGVMLQGSVTGFDQFSLVLERGGQIQLVYKHAISTLQPAHPLNLGPDEASEGESES*