ggKbase home page

H2-16-all-fractions_k255_8535903

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_8535903_1
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1571)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IXH0_PSEUL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK77903.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
H2-16-all-fractions_k255_8535903_2
unknown

Not on your lists

2315..2719
DNA (405bp) protein (135aa)

This feature has no annotations

H2-16-all-fractions_k255_8535903_3
unknown

Not on your lists

comp(2716..2850)
DNA (135bp) protein (45aa)

This feature has no annotations

H2-16-all-fractions_k255_8535903_4
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2861..3670)
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KDB05346.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
ABC transporter permease protein id=4195232 bin=GWC2_Chloroflexi_73_18 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
spermidine/putrescine ABC transporter permease protein
H2-16-all-fractions_k255_8535903_5
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3670..4401)
DNA (732bp) protein (244aa)
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KEZ77512.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
spermidine/putrescine ABC transporter permease id=4195233 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
potH; binding-protein-dependent transport systems inner membrane component
H2-16-all-fractions_k255_8535903_6
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4594..5742)
DNA (1149bp) protein (383aa)
transporter n=1 Tax=Acetobacter aceti RepID=UPI00022607F0
Transporter substrate-binding periplasmic protein {ECO:0000313|EMBL:KEZ77513.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
transporter substrate-binding periplasmic protein
H2-16-all-fractions_k255_8535903_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(5739..6779)
DNA (1041bp) protein (347aa)
ATPase component of ABC-type spermidine/putrescine transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8I5G3_AMYMU
spermidine/putrescine ABC transporter ATPase
Tax=RBG_16_Chloroflexi_63_12_curated
H2-16-all-fractions_k255_8535903_8
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(6751..8034)
DNA (1284bp) protein (428aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KGQ21092.2}; EC=2.6.1.19 {ECO:0000313|EMBL:KGQ21092.2};; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] id=14633138 bin=bin9_gal15 species=Desulfovibrio longus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
4-aminobutyrate aminotransferase
H2-16-all-fractions_k255_8535903_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8134..8433)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PYW0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAN45381.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
H2-16-all-fractions_k255_8535903_10
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8458..9270
DNA (813bp) protein (271aa)
P-aminobenzoate N-oxygenase AurF n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B7B7A5
Uncharacterized protein {ECO:0000313|EMBL:EAP90532.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
H2-16-all-fractions_k255_8535903_11
unknown

Not on your lists

comp(9316..10239)
DNA (924bp) protein (308aa)

This feature has no annotations

H2-16-all-fractions_k255_8535903_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10334..10903
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000366CB3F
Tax=RBG_16_Actinobacteria_68_12_curated
H2-16-all-fractions_k255_8535903_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(10926..12107)
DNA (1182bp) protein (394aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34); K00021 hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] id=14631451 bin=bin9_gal15 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34)
Tax=CSP1_3_Armatimonadetes
H2-16-all-fractions_k255_8535903_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12148..12996
DNA (849bp) protein (283aa)
5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4U6_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
H2-16-all-fractions_k255_8535903_15
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13068..13268
DNA (201bp) protein (67aa)
Cold shock protein CspC n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NAG8_9BACL
Cold shock protein CspC {ECO:0000313|EMBL:EMR05593.1}; TaxID=1235279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis DSE10.;"
cold-shock DNA-binding domain-containing protein
H2-16-all-fractions_k255_8535903_16
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13436..13726
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Streptomyces somaliensis RepID=UPI00029B044A
glutamyl-tRNA(gln) amidotransferase subunit C
H2-16-all-fractions_k255_8535903_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13723..15129
DNA (1407bp) protein (469aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0E3_CONWI
glutamyl-tRNA(Gln) amidotransferase subunit alpha
H2-16-all-fractions_k255_8535903_18
unknown

Not on your lists

15126..15386
DNA (261bp) protein (87aa)

This feature has no annotations

H2-16-all-fractions_k255_8535903_19
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15373..16770
DNA (1398bp) protein (466aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DXL1_THIND
gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
Tax=RBG_16_Actinobacteria_64_13_curated
H2-16-all-fractions_k255_8535903_20
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16736..17956)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00036DB1B4
Uncharacterized protein {ECO:0000313|EMBL:EMD29579.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
major facilitator transporter
H2-16-all-fractions_k255_8535903_21
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18036..19238)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000376928E
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AKG46529.1}; TaxID=408015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
major facilitator superfamily protein
H2-16-all-fractions_k255_8535903_22
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19238..20470)
DNA (1233bp) protein (411aa)
YfiS-like MFS-type transporter n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VPU2_9ACTO
yfiS-like MFS-type transporter
YfiS-like MFS-type transporter {ECO:0000313|EMBL:AGZ38978.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
H2-16-all-fractions_k255_8535903_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20470..21234)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037C39CD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H2-16-all-fractions_k255_8535903_24
unknown

Not on your lists

comp(21237..21365)
DNA (129bp) protein (43aa)

This feature has no annotations

H2-16-all-fractions_k255_8535903_25
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21377..21838)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037B7E79
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ43554.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
H2-16-all-fractions_k255_8535903_26
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21948..22586)
DNA (639bp) protein (213aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
H2-16-all-fractions_k255_8535903_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22765..23418)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y3G0_THEBD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H2-16-all-fractions_k255_8535903_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23451..24593
DNA (1143bp) protein (381aa)
Phosphoserine aminotransferase / L-aspartate aminotransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS4_RUBXD
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Tax=RBG_16_Actinobacteria_68_12_curated
H2-16-all-fractions_k255_8535903_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24590..26176
DNA (1587bp) protein (529aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0B9_CONWI
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ADB51979.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-16-all-fractions_k255_8535903_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

26179..26652
DNA (474bp) protein (158aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCV6_GEOOG
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 38 in total

View Taxonomy