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H2-16-all-fractions_k255_518861

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_518861_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1547)
DNA (1545bp) protein (515aa)
Putative solute-binding component of ABC transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P073_9DELT
Putative solute-binding component of ABC transporter {ECO:0000313|EMBL:EPX55637.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
putative ABC transporter substrate binding protein
H2-16-all-fractions_k255_518861_2
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(1580..2731)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034C5E43
Histidine kinase {ECO:0000313|EMBL:KIE09162.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
two-component hybrid histidine kinase
H2-16-all-fractions_k255_518861_3
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2829..3452)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T5M1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE01748.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
TPR repeat
H2-16-all-fractions_k255_518861_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3488..4204)
DNA (717bp) protein (239aa)
glutaredoxin-like protein
Tax=GWA2_Burkholderiales_64_37_curated
H2-16-all-fractions_k255_518861_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4308..6404)
DNA (2097bp) protein (699aa)
Putative ATP-binding ABC transporter protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPR1_9BURK
Putative ATP-binding ABC transporter protein {ECO:0000313|EMBL:EGJ10329.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter ATP-binding protein
H2-16-all-fractions_k255_518861_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6409..7305)
DNA (897bp) protein (299aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPR2_9BURK
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EGJ10330.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative methyltransferase
H2-16-all-fractions_k255_518861_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7302..8477)
DNA (1176bp) protein (392aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Succinyl-diaminopimelate desuccinylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI02_9BURK
succinyl-diaminopimelate desuccinylase
H2-16-all-fractions_k255_518861_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8494..9711)
DNA (1218bp) protein (406aa)
twitching motility protein PilT n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C6ABB
twitching motility protein PilU PilT like
Uncharacterized protein {ECO:0000313|EMBL:EGJ10332.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
H2-16-all-fractions_k255_518861_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9818..10642)
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (Tetrahydrodipicolinate N-succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase) (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=2 Tax=Thiomonas RepID=D5X1X5_THIK1
H2-16-all-fractions_k255_518861_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10639..11868)
DNA (1230bp) protein (410aa)
succinyldiaminopimelate transaminase (EC:2.6.1.11)
Succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:ABM94766.1}; EC=2.6.1.11 {ECO:0000313|EMBL:ABM94766.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
succinyldiaminopimelate aminotransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI00037DEB51
H2-16-all-fractions_k255_518861_11
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12176..13105
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI92_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95281.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
H2-16-all-fractions_k255_518861_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13109..13987)
DNA (879bp) protein (293aa)
Putative two-component transcriptional response regulator n=2 Tax=Burkholderia pseudomallei RepID=Q63X06_BURPS
Transcriptional regulatory protein OmpR {ECO:0000313|EMBL:EWS52786.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
two-component transcriptional response regulator
H2-16-all-fractions_k255_518861_13
unknown

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14200..15489
DNA (1290bp) protein (430aa)

This feature has no annotations

H2-16-all-fractions_k255_518861_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15707..16780)
DNA (1074bp) protein (358aa)
splB1; DNA repair photolyase (EC:4.1.99.3)
DNA repair photolyase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KD87_CUPNH
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
H2-16-all-fractions_k255_518861_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16782..17639)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZ29_VARPE
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28489.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
H2-16-all-fractions_k255_518861_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17711..18247)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B361
Uncharacterized protein {ECO:0000313|EMBL:KGM55570.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
H2-16-all-fractions_k255_518861_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18309..18671
DNA (363bp) protein (121aa)
translation initiation factor SUI1; K03113 translation initiation factor 1 id=5083063 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
translation initiation factor SUI1
Tax=GWE1_Burkholderiales_65_30_curated
H2-16-all-fractions_k255_518861_18
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18772..19185)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H4B0_METFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE48677.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
H2-16-all-fractions_k255_518861_19
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19235..20689)
DNA (1455bp) protein (485aa)
Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY71_VARPE
XRE family transcriptional regulator
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
H2-16-all-fractions_k255_518861_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20862..22019
DNA (1158bp) protein (386aa)
methylcitrate synthase (EC:2.3.3.5)
Citrate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1J4_9BURK
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
H2-16-all-fractions_k255_518861_21
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22049..23815
DNA (1767bp) protein (589aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IZ56_9BURK
Aconitate hydratase {ECO:0000313|EMBL:ESJ21026.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
Displaying 21 items

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