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H2-16-all-fractions_k255_536696

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_536696_1
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(48..530)
DNA (483bp) protein (161aa)
Type VI secretion system effector, Hcp1 family n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A6J0_METMM
type VI secretion system effector
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:AEF99291.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
H2-16-all-fractions_k255_536696_2
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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884..2812
DNA (1929bp) protein (643aa)
Transmembrane protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RGP6_9BURK
Transmembrane protein {ECO:0000313|EMBL:EKS70338.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
RSp0559; transmembrane protein
H2-16-all-fractions_k255_536696_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2887..3825
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003738083
Uncharacterized protein {ECO:0000313|EMBL:KJR65881.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
H2-16-all-fractions_k255_536696_4
unknown

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comp(3889..4143)
DNA (255bp) protein (85aa)

This feature has no annotations

H2-16-all-fractions_k255_536696_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4358..5173
DNA (816bp) protein (272aa)
GntR family transcriptional regulator id=1270550 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
GntR family transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
H2-16-all-fractions_k255_536696_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5174..5965
DNA (792bp) protein (264aa)
Extracellular solute-binding protein family 3 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1K7_LEPCP
extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACB35469.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
H2-16-all-fractions_k255_536696_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5983..6660
DNA (678bp) protein (226aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1K6_LEPCP
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACB35468.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
H2-16-all-fractions_k255_536696_8
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6663..7313
DNA (651bp) protein (217aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1K5_LEPCP
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACB35467.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
H2-16-all-fractions_k255_536696_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7303..8052
DNA (750bp) protein (250aa)
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1K4_LEPCP
ABC transporter-like protein
ABC transporter-related protein {ECO:0000313|EMBL:ACB35466.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
H2-16-all-fractions_k255_536696_10
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8167..8676
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037B5209
Uncharacterized protein {ECO:0000313|EMBL:EAY25298.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
tetratricopeptide repeat protein
H2-16-all-fractions_k255_536696_11
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8733..9533
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4D2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP42615.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
H2-16-all-fractions_k255_536696_12
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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comp(9523..9939)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TF43_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF25519.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
CHRD domain containing protein
H2-16-all-fractions_k255_536696_13
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10037..10504)
DNA (468bp) protein (156aa)
50S ribosomal protein L21 n=1 Tax=Thiobacillus thioparus RepID=UPI00036D7D78
Uncharacterized protein {ECO:0000313|EMBL:CDW92525.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
conserved hypothethical protein
H2-16-all-fractions_k255_536696_14
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

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10898..11842
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003702F84
Putative Pilin gene-inverting protein {ECO:0000313|EMBL:ERE47070.1}; Flags: Fragment;; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Cricetinae; Cricetulus.;" source="Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).;"
transposase
H2-16-all-fractions_k255_536696_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12104..12202
DNA (99bp) protein (33aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLN6_RUBGI
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:BAL93923.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying 15 items

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