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H2-16-all-fractions_k255_2939577

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_2939577_1
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..442)
DNA (441bp) protein (147aa)
Glycosyl hydrolase, BNR repeat protein n=1 Tax=Burkholderia sp. H160 RepID=B5WGA1_9BURK
Glycosyl hydrolase, BNR repeat protein {ECO:0000313|EMBL:EEA02655.1}; Flags: Precursor;; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
hypothetical protein
H2-16-all-fractions_k255_2939577_2
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(461..1831)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6ARN0_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN48578.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
H2-16-all-fractions_k255_2939577_3

Not on your lists

comp(1851..3587)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GWX0_CUPNN
Uncharacterized protein {ECO:0000313|EMBL:KKN77807.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
H2-16-all-fractions_k255_2939577_4
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3715..4515)
DNA (801bp) protein (267aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5R0_CAUSK
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABZ71068.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
H2-16-all-fractions_k255_2939577_5
unknown

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comp(4549..5187)
DNA (639bp) protein (213aa)

This feature has no annotations

H2-16-all-fractions_k255_2939577_6
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5202..5717)
DNA (516bp) protein (172aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EFP1_AMYSD
hypothetical protein
H2-16-all-fractions_k255_2939577_7
Aquabacterium sp. PL1F5, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5925..6332
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y303_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:ACB12979.1}; TaxID=503996 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. PL1F5.;"
protein of unknown function DUF1232
H2-16-all-fractions_k255_2939577_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6348..7256)
DNA (909bp) protein (303aa)
Superoxide dismutase, Fe-Mn family n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RMH1_COMTE
Superoxide dismutase, Fe-Mn family {ECO:0000313|EMBL:EHN66499.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
putative superoxide dismutase
H2-16-all-fractions_k255_2939577_9
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7413..8483)
DNA (1071bp) protein (357aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudomonas syringae pv. tomato (strain DC3000) RepID=Q87XV7_PSESM
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AAO57525.1}; TaxID=223283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. tomato (strain DC3000).;"
H2-16-all-fractions_k255_2939577_10
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8659..8955
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V4ZPV4_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGK94297.1}; TaxID=323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. tomato.;"
H2-16-all-fractions_k255_2939577_11
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9021..9827
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Burkholderia cenocepacia RepID=A0AX38_BURCH
short-chain dehydrogenase/reductase SDR
Short chain dehydrogenase family protein {ECO:0000313|EMBL:AIO22555.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
H2-16-all-fractions_k255_2939577_12
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9840..10961)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=C5AR06_METEA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHP89924.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
H2-16-all-fractions_k255_2939577_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(11007..11591)
DNA (585bp) protein (195aa)
Putative secreted protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029E7_SOLUE
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ABJ82344.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H2-16-all-fractions_k255_2939577_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11899..13197
DNA (1299bp) protein (433aa)
Twitching motility protein PilT (Fragment) n=1 Tax=sediment metagenome RepID=D9PFY6_9ZZZZ
Twitching motility protein PilT {ECO:0000313|EMBL:KGQ18124.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
pilU1; twitching motility protein
H2-16-all-fractions_k255_2939577_15
unknown

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comp(13238..13585)
DNA (348bp) protein (116aa)

This feature has no annotations

H2-16-all-fractions_k255_2939577_16
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14063..14515
DNA (453bp) protein (151aa)
Heat shock protein, HSP20 family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHG1_METPP
Spore protein SP21 {ECO:0000313|EMBL:EWS53224.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
HSP20 family protein
H2-16-all-fractions_k255_2939577_17
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14549..14929
DNA (381bp) protein (127aa)
Putative heat shock protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHG2_METPP
heat shock protein
Putative heat shock protein {ECO:0000313|EMBL:ABM95001.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
H2-16-all-fractions_k255_2939577_18
unknown

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14992..15303
DNA (312bp) protein (104aa)

This feature has no annotations

H2-16-all-fractions_k255_2939577_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15246..15656)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPX1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95058.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_2939577_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15688..16002)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVA7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12275.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
flgM; negative regulator of flagellin synthesis FlgM
H2-16-all-fractions_k255_2939577_21
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16124..16882)
DNA (759bp) protein (253aa)
flagella basal body P-ring formation protein FlgA n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034876AE
flgA; flagellar basal body P-ring biosynthesis protein FlgA
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
H2-16-all-fractions_k255_2939577_22
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17088..17507
DNA (420bp) protein (140aa)
flagellar biosynthesis protein FlgB n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348107B
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
flgB; flagellar basal body protein
H2-16-all-fractions_k255_2939577_23
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17627..18043
DNA (417bp) protein (139aa)
flagellar basal body rod protein FlgC n=1 Tax=Caldimonas manganoxidans RepID=UPI000379A7B3
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
flagellar basal-body rod protein FlgC
H2-16-all-fractions_k255_2939577_24
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18056..18805
DNA (750bp) protein (250aa)
flagellar hook capping protein FlgD n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034654D4
flagellar hook capping protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
H2-16-all-fractions_k255_2939577_25
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18832..20100
DNA (1269bp) protein (423aa)
Flagellar basal body and hook protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKD4_METPP
flgE; flagellar basal body and hook protein
Flagellar hook protein FlgE {ECO:0000313|EMBL:EWS54756.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
H2-16-all-fractions_k255_2939577_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20123..20848
DNA (726bp) protein (242aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LML0_9BURK
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:EGJ09578.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
flgF; flagellar basal-body rod protein FlgF
H2-16-all-fractions_k255_2939577_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21366..21656
DNA (291bp) protein (97aa)
flagellar basal body rod protein FlgG n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034885DD
flagellar basal-body rod protein FlgG
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:ACB34994.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Displaying 27 items

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