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H2-16-all-fractions_k255_3051205

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_3051205_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..772
DNA (771bp) protein (257aa)
circadian clock protein KaiC (EC:2.7.11.1)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Acidovorax sp. CF316 RepID=J0KIJ0_9BURK
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:EJE50978.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
H2-16-all-fractions_k255_3051205_2
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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769..1131
DNA (363bp) protein (121aa)
KaiB domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EFI2_9BURK
KaiB domain-containing protein {ECO:0000313|EMBL:EJE50979.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
KaiB domain-containing protein
H2-16-all-fractions_k255_3051205_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1137..1430
DNA (294bp) protein (98aa)
KaiB domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6C1_GEODF
KaiB domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KJB90324.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
H2-16-all-fractions_k255_3051205_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1455..3953
DNA (2499bp) protein (833aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031F37CC
PAS domain-containing protein
H2-16-all-fractions_k255_3051205_5
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

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4941..5993
DNA (1053bp) protein (351aa)
Metallophosphoesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0A1_9BURK
metallophosphoesterase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
H2-16-all-fractions_k255_3051205_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6210..9335
DNA (3126bp) protein (1042aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003703F11
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABQ67681.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_3051205_7
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9320..9979)
DNA (660bp) protein (220aa)
membrane protein n=1 Tax=Methylobacter marinus RepID=UPI00036AA47D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG02210.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
H2-16-all-fractions_k255_3051205_8
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10011..11285)
DNA (1275bp) protein (425aa)
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEE9_METPP
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
H2-16-all-fractions_k255_3051205_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11290..12189)
DNA (900bp) protein (300aa)
UPI0003CE751E related cluster n=1 Tax=unknown RepID=UPI0003CE751E
Transcriptional regulator GstR {ECO:0000313|EMBL:CDX34389.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
LysR family transcriptional regulator
H2-16-all-fractions_k255_3051205_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12306..12857
DNA (552bp) protein (184aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003CFB99D related cluster n=1 Tax=unknown RepID=UPI0003CFB99D
peroxidase-like protein
H2-16-all-fractions_k255_3051205_11
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12870..13478
DNA (609bp) protein (203aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5G6_9BURK
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:EDT08688.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
H2-16-all-fractions_k255_3051205_12
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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13691..16459
DNA (2769bp) protein (923aa)
sensory transduction histidine kinase (EC:2.7.3.-)
Putative sensory transduction histidine kinase of highly complex domain structure {ECO:0000313|EMBL:CAI09580.1}; EC=2.7.3.- {ECO:0000313|EMBL:CAI09580.1};; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000360FD56
H2-16-all-fractions_k255_3051205_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16461..17711
DNA (1251bp) protein (417aa)
ethanolamine ammonia-lyase large subunit; K03735 ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] id=5082816 bin=GWF1_Burkholderiales_GWF1_66_17 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative ethanolamine ammonia-lyase heavy chain
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 13 items

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