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H2-16-all-fractions_k255_3227932

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_3227932_1
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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349..3162
DNA (2814bp) protein (938aa)
TonB system transporter n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B34199
tonB-dependent Receptor Plug domain protein
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:CDG84932.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H2-16-all-fractions_k255_3227932_2
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3360..4118)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6I8_LEPCP
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACB34824.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
H2-16-all-fractions_k255_3227932_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4297..4953)
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
adk; adenylate kinase Adk (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQU4_9BURK
H2-16-all-fractions_k255_3227932_4
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5146..5925)
DNA (780bp) protein (260aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) KdsB (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS02_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
H2-16-all-fractions_k255_3227932_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5938..6153)
DNA (216bp) protein (72aa)
UPF0434 protein RGE_32010 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU53_RUBGI
hypothetical protein
UPF0434 protein RGE_32010 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_3227932_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6190..7263)
DNA (1074bp) protein (358aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
lpxK; tetraacyldisaccharide 4'-kinase LpxK (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQU7_9BURK
H2-16-all-fractions_k255_3227932_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7316..7747)
DNA (432bp) protein (144aa)
Biopolymer transport protein ExbD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU51_RUBGI
exbD; biopolymer transport protein ExbD
Biopolymer transport protein ExbD {ECO:0000313|EMBL:BAL96538.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_3227932_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7744..8496)
DNA (753bp) protein (251aa)
flagellar motor protein MotA, partial n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B464A9
biopolymer transport exbB-like transmembrane protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_3227932_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8806..10242
DNA (1437bp) protein (479aa)
xseA_sodB; exodeoxyribonuclease 7 large subunit/superoxide dismutase (EC:1.15.1.1 3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU49_RUBGI
H2-16-all-fractions_k255_3227932_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10373..10954
DNA (582bp) protein (194aa)
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Superoxide dismutase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2A4_ACIAP
H2-16-all-fractions_k255_3227932_11
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11294..12424
DNA (1131bp) protein (377aa)
Putative secreted substrate binding protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH59_METPP
secreted substrate binding protein
Putative secreted substrate binding protein {ECO:0000313|EMBL:ABM94898.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
H2-16-all-fractions_k255_3227932_12
unknown

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12582..12872
DNA (291bp) protein (97aa)

This feature has no annotations

H2-16-all-fractions_k255_3227932_13
unknown

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13060..13386
DNA (327bp) protein (109aa)

This feature has no annotations

H2-16-all-fractions_k255_3227932_14
unknown

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comp(13452..13775)
DNA (324bp) protein (108aa)

This feature has no annotations

H2-16-all-fractions_k255_3227932_15
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13956..14810
DNA (855bp) protein (285aa)
Phytanoyl-CoA dioxygenase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MYQ2_CORCM
phytanoyl-CoA dioxygenase family protein
Phytanoyl-CoA dioxygenase family protein {ECO:0000313|EMBL:AFE04912.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
H2-16-all-fractions_k255_3227932_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15216..15659
DNA (444bp) protein (148aa)
orn/lys/arg decarboxylase (EC:4.1.1.-)
Arginine/lysine/ornithine decarboxylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNC2_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 16 items

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