ggKbase home page

H2-16-all-fractions_k255_3618669

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_3618669_1
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3..962)
DNA (960bp) protein (320aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8S1_TERSS
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADV84108.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
H2-16-all-fractions_k255_3618669_2
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1025..1891
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037DEEBA
Sulfite exporter TauE/SafE family protein {ECO:0000313|EMBL:EST17583.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
hypothetical protein
H2-16-all-fractions_k255_3618669_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1895..2362)
DNA (468bp) protein (156aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0U7S8_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE52107.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
AsnC family transcriptional regulator
H2-16-all-fractions_k255_3618669_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2471..3685
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127D3_POLSJ
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE45359.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
H2-16-all-fractions_k255_3618669_5
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3686..3823)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RP33_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EPX95441.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
H2-16-all-fractions_k255_3618669_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3828..4679)
DNA (852bp) protein (284aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Variovorax paradoxus RepID=UPI00035F5D1A
H2-16-all-fractions_k255_3618669_7
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5038..6021
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QCZ7_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW88770.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
H2-16-all-fractions_k255_3618669_8
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6125..7876
DNA (1752bp) protein (584aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
sensor histidine kinase n=1 Tax=Janthinobacterium lividum RepID=UPI000288DD94
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
H2-16-all-fractions_k255_3618669_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7920..9083
DNA (1164bp) protein (388aa)
Variovorax paradoxus strain MEDvA23 contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31270.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KIQ31270.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Aminotransferase class I and II n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V523_VARPE
class I and II aminotransferase
H2-16-all-fractions_k255_3618669_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9104..10189)
DNA (1086bp) protein (362aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ABM36436.1}; EC=1.13.11.27 {ECO:0000313|EMBL:ABM36436.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLA8_POLNA
H2-16-all-fractions_k255_3618669_11
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10210..10794
DNA (585bp) protein (195aa)
AsnC family transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI000381A91C
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CDS51811.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
AsnC family transcriptional regulator
H2-16-all-fractions_k255_3618669_12
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10836..11600
DNA (765bp) protein (255aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KIG09448.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KIG09448.1};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2ITP3_9PSED
short-chain dehydrogenase/reductase sdr
H2-16-all-fractions_k255_3618669_13
Pseudomonas sp. 2(2015), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11616..12341)
DNA (726bp) protein (242aa)
dehydrogenase n=1 Tax=gamma proteobacterium WG36 RepID=UPI00037EF72A
Dehydrogenase {ECO:0000313|EMBL:KJK17182.1}; TaxID=1619950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 2(2015).;"
short chain dehydrogenase/reductase family protein
H2-16-all-fractions_k255_3618669_14
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12446..13357
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PS87_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AHB06137.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
H2-16-all-fractions_k255_3618669_15
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13359..13727)
DNA (369bp) protein (123aa)
Candidate histidine kinase, hybrid n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3R1_RAMTT
hybrid histidine kinase
Candidate histidine kinase, hybrid {ECO:0000313|EMBL:AEG93718.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
H2-16-all-fractions_k255_3618669_16
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13991..14737
DNA (747bp) protein (249aa)
putative short-chain dehydrogenase/reductase SDR precursor (EC:1.-.-.-)
oxidoreductase n=1 Tax=Pseudomonas luteola RepID=UPI0002F90D92
Uncharacterized protein {ECO:0000313|EMBL:ENA29853.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
H2-16-all-fractions_k255_3618669_17
Pseudomonas sp. GM41(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14697..15065)
DNA (369bp) protein (123aa)
Arabinose efflux permease family protein n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J3G1A2_9PSED
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EUB75244.1}; TaxID=1144708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM41(2012).;"
major facilitator superfamily transporter
Displaying 17 items

View Taxonomy