ggKbase home page

H2-16-all-fractions_k255_4644147

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_4644147_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2248
DNA (2247bp) protein (749aa)
Candidate histidine kinase, atypical hybrid n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX94_RAMTT
atypical hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
H2-16-all-fractions_k255_4644147_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2245..4398
DNA (2154bp) protein (718aa)
Signal transduction histidine kinase n=1 Tax=Polaromonas sp. CF318 RepID=J2KUQ0_9BURK
atypical hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
H2-16-all-fractions_k255_4644147_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4451..4888)
DNA (438bp) protein (146aa)
Response regulator receiver protein CheY-like n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS52_RUBGI
response regulator receiver protein CheY-like
Response regulator receiver protein CheY-like {ECO:0000313|EMBL:BAL95839.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_4644147_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5108..6553)
DNA (1446bp) protein (482aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS31_RUBGI
Fis family sigma-54 specific transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:BAL95818.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_4644147_5
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6854..7123
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YWS8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO96040.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
H2-16-all-fractions_k255_4644147_6
unknown

Not on your lists

7185..7532
DNA (348bp) protein (116aa)

This feature has no annotations

H2-16-all-fractions_k255_4644147_7
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7609..8925)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EA1507
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ADI30206.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
H2-16-all-fractions_k255_4644147_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8978..10060)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B2FF57
methylamine utilization protein/Cytochrome c peroxidase
Tax=RBG_16_Betaproteobacteria_66_20_curated
H2-16-all-fractions_k255_4644147_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10068..10640)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00035F89C8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
H2-16-all-fractions_k255_4644147_10
unknown

Not on your lists

10711..10869
DNA (159bp) protein (53aa)

This feature has no annotations

H2-16-all-fractions_k255_4644147_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10939..11487
DNA (549bp) protein (183aa)
NADPH-dependent FMN reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365A960
Predicted flavoprotein {ECO:0000313|EMBL:GAD21509.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
nadph-dependent fmn reductase
H2-16-all-fractions_k255_4644147_12
unknown

Not on your lists

comp(11584..11841)
DNA (258bp) protein (86aa)
hypothetical protein
H2-16-all-fractions_k255_4644147_13
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11978..12211)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI0003819FF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU49958.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
H2-16-all-fractions_k255_4644147_14
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12546..13988
DNA (1443bp) protein (481aa)
FOG: GGDEF domain n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SHY3_HAHCH
diguanylate cyclase
FOG: GGDEF domain {ECO:0000313|EMBL:ABC29741.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
H2-16-all-fractions_k255_4644147_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14028..14513
DNA (486bp) protein (162aa)
cupin 2 barrel-domain containing protein id=5080434 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cupin
Tax=GWE1_Burkholderiales_65_30_curated
H2-16-all-fractions_k255_4644147_16
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14535..15032)
DNA (498bp) protein (166aa)
Thioesterase superfamily protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMY0_POLNA
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABM37008.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
H2-16-all-fractions_k255_4644147_17
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15054..15830)
DNA (777bp) protein (259aa)
Probable extracellular solute-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HZY7_BORPD
putative extracellular solute-binding protein, family 3
Putative extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:AJK50498.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
H2-16-all-fractions_k255_4644147_18
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16001..16510
DNA (510bp) protein (170aa)
msrB; peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:AEI81589.1}; EC=1.8.4.12 {ECO:0000313|EMBL:AEI81589.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
protein-methionine-S-oxide reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA153
H2-16-all-fractions_k255_4644147_19
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16543..17283
DNA (741bp) protein (247aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000377E1E2
methionine sulfoxide reductase A
H2-16-all-fractions_k255_4644147_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17306..17560)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DFU3_9BACT
aldehyde dehydrogenase
Tax=CG_Rhodof_04
Displaying 20 items

View Taxonomy