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H2-16-all-fractions_k255_5143126

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_5143126_1
unknown

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)

This feature has no annotations

H2-16-all-fractions_k255_5143126_2
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290..2989)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBQ4_MYXSD
hypothetical protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
H2-16-all-fractions_k255_5143126_3
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3165..3974
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003675BAF
Transcriptional regulator
Beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family {ECO:0000313|EMBL:EJL90013.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
H2-16-all-fractions_k255_5143126_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4204..5457
DNA (1254bp) protein (418aa)
Diguanylate phosphodiesterase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHY1_METPP
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ABM95170.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
H2-16-all-fractions_k255_5143126_5
Leptothrix ochracea, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5484..6056
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Leptothrix ochracea L12 RepID=I4Z608_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIM31650.1}; TaxID=735332 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix ochracea L12.;"
YaeQ family protein
H2-16-all-fractions_k255_5143126_6
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6096..6992)
DNA (897bp) protein (299aa)
hypothetical protein id=12553280 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
H2-16-all-fractions_k255_5143126_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7216..9252)
DNA (2037bp) protein (679aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
ATP-dependent DNA helicase RecQ n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKW7_9BURK
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EHR73710.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
H2-16-all-fractions_k255_5143126_8
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9391..9897
DNA (507bp) protein (169aa)
auxin-binding protein, putative n=1 Tax=Pseudomonas syringae RepID=UPI0001E29211
auxin-binding protein
Auxin-binding protein, putative {ECO:0000313|EMBL:EGH63151.1}; TaxID=629265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. maculicola str. ES4326.;"
H2-16-all-fractions_k255_5143126_9
unknown

Not on your lists

comp(9915..10379)
DNA (465bp) protein (155aa)

This feature has no annotations

H2-16-all-fractions_k255_5143126_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10515..11033
DNA (519bp) protein (173aa)
Single-stranded DNA-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIC5_9BURK
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ssb; single-stranded DNA-binding protein
H2-16-all-fractions_k255_5143126_11
unknown

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11344..11535
DNA (192bp) protein (64aa)

This feature has no annotations

H2-16-all-fractions_k255_5143126_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12469..13044
DNA (576bp) protein (192aa)
HNH endonuclease n=1 Tax=Variovorax paradoxus RepID=UPI00037732A4
Restriction endonuclease {ECO:0000313|EMBL:EJL77133.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hnh endonuclease
H2-16-all-fractions_k255_5143126_13
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13125..14726)
DNA (1602bp) protein (534aa)
Transcriptional regulator (Sigma54-dependent regulator) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KTJ2_BORA1
rtcR; transcriptional regulator
Transcriptional regulator (Sigma54-dependent regulator) {ECO:0000313|EMBL:CAJ51019.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
H2-16-all-fractions_k255_5143126_14
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14930..16504
DNA (1575bp) protein (525aa)
TROVE domain-containing protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q059_ACIAP
TROVE domain-containing protein
TROVE domain-containing protein {ECO:0000313|EMBL:ADX43942.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
H2-16-all-fractions_k255_5143126_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17143..18366
DNA (1224bp) protein (408aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
RTCB protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FA71BE
hypothetical protein
H2-16-all-fractions_k255_5143126_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18414..19235
DNA (822bp) protein (274aa)
Nucleotidyltransferase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q061_ACIAP
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:ADX43944.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
H2-16-all-fractions_k255_5143126_17
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19250..20287
DNA (1038bp) protein (346aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
RNA 3''''-terminal-phosphate cyclase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346013A
H2-16-all-fractions_k255_5143126_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20396..22423)
DNA (2028bp) protein (676aa)
Peptidase M41 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4S6_VARPE
peptidase m41
Peptidase M41 {ECO:0000313|EMBL:ADU37012.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
H2-16-all-fractions_k255_5143126_19
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22416..22658)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQ90_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM33128.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
H2-16-all-fractions_k255_5143126_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22990..23637)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLW4_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying 20 items

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