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H2-16-all-fractions_k255_5318353

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_5318353_1
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1487)
DNA (1485bp) protein (495aa)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; Non-discriminating aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=ND-AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Aspartate--tRNA ligase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=SYD_LEPCP
aspartyl-tRNA synthetase
H2-16-all-fractions_k255_5318353_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1629..2288)
DNA (660bp) protein (220aa)
membrane protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C6AD4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_5318353_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2350..2703)
DNA (354bp) protein (118aa)
Regulatory protein, FmdB family n=3 Tax=Ralstonia RepID=B2UFH4_RALPJ
FmdB family regulatory protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_5318353_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2974..4557)
DNA (1584bp) protein (528aa)
ubiB; 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway UbiB (EC:1.14.13.-)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis protein UbiB {ECO:0000256|HAMAP-Rule:MF_00414}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway UbiB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN45_RUBGI
H2-16-all-fractions_k255_5318353_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4628..5167)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034D43FC
Uncharacterized protein {ECO:0000313|EMBL:EGJ10072.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
H2-16-all-fractions_k255_5318353_6
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5204..5899)
DNA (696bp) protein (232aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YCV4_THIV6
HAD-superfamily hydrolase
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:AFL74822.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
H2-16-all-fractions_k255_5318353_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5842..6861)
DNA (1020bp) protein (340aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase GalE n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN41_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_5318353_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6861..7592)
DNA (732bp) protein (244aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034709FF
H2-16-all-fractions_k255_5318353_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7618..8034)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYG2_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_5318353_10
unknown

Not on your lists

8193..9455
DNA (1263bp) protein (421aa)

This feature has no annotations

H2-16-all-fractions_k255_5318353_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9479..9970)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN00_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70770.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
H2-16-all-fractions_k255_5318353_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9994..10467)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJF2_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95691.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
H2-16-all-fractions_k255_5318353_13
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10529..11602
DNA (1074bp) protein (358aa)
Protein bugT, putative n=1 Tax=Ricinus communis RepID=B9TJE0_RICCO
Putative exported protein {ECO:0000313|EMBL:CDS50486.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein
H2-16-all-fractions_k255_5318353_14
unknown

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11613..11816
DNA (204bp) protein (68aa)

This feature has no annotations

H2-16-all-fractions_k255_5318353_15
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11827..12255
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2J6P8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EJI95219.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
hypothetical protein
H2-16-all-fractions_k255_5318353_16
unknown

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12447..12737
DNA (291bp) protein (97aa)

This feature has no annotations

H2-16-all-fractions_k255_5318353_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12753..13154)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRW0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91950.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
Displaying 17 items

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