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H2-16-all-fractions_k255_5422756

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_5422756_1
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..527
DNA (525bp) protein (175aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126N2_POLSJ
H2-16-all-fractions_k255_5422756_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(608..1276)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X177_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34012.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
conserved exported protein of unknown function
H2-16-all-fractions_k255_5422756_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1422..3881)
DNA (2460bp) protein (820aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM52_9BURK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHR71937.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
H2-16-all-fractions_k255_5422756_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3959..6415)
DNA (2457bp) protein (819aa)
Penicillin amidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZB3_9GAMM
peptidase S45
Peptidase S45 {ECO:0000313|EMBL:AHX14190.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
H2-16-all-fractions_k255_5422756_5
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6460..7719)
DNA (1260bp) protein (420aa)
Leucine rich repeat protein n=1 Tax=Burkholderia multivorans CF2 RepID=J5C427_9BURK
Protein kinase {ECO:0000313|EMBL:KHS16569.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
serine/threonine protein kinase
H2-16-all-fractions_k255_5422756_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7719..8555)
DNA (837bp) protein (279aa)
DNA-binding helix-turn-helix protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0M5_9PROT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM00919.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transcriptional regulator XRE family
H2-16-all-fractions_k255_5422756_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8675..9064
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0M6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM00920.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
polyketide cyclase
H2-16-all-fractions_k255_5422756_8
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9120..11036
DNA (1917bp) protein (639aa)
Propionyl-CoA synthetase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12A93_POLSJ
prpE; propionyl-CoA synthetase
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
H2-16-all-fractions_k255_5422756_9
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11124..12032
DNA (909bp) protein (303aa)
Putative signal transduction protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1H6_LEPCP
Uncharacterized protein {ECO:0000313|EMBL:KGM42443.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
putative signal transduction protein
H2-16-all-fractions_k255_5422756_10

Not on your lists

12167..12856
DNA (690bp) protein (230aa)
Putative hydrolase n=1 Tax=mine drainage metagenome RepID=E6PJN0_9ZZZZ
Putative hydrolase {ECO:0000313|EMBL:CBH95131.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
esterase
H2-16-all-fractions_k255_5422756_11
unknown

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12960..13199
DNA (240bp) protein (80aa)

This feature has no annotations

H2-16-all-fractions_k255_5422756_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13258..14160
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZD7_VARPE
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32009.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
LysR family transcriptional regulator
H2-16-all-fractions_k255_5422756_13
unknown

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14245..14988
DNA (744bp) protein (248aa)

This feature has no annotations

H2-16-all-fractions_k255_5422756_14
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14995..16002
DNA (1008bp) protein (336aa)
ATP-binding region, ATPase-like:Stage II sporulation E n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46RB3_CUPPJ
ATP-binding protein
ATP-binding region, ATPase-like:Stage II sporulation E {ECO:0000313|EMBL:AAZ64321.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
H2-16-all-fractions_k255_5422756_15
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16170..17360
DNA (1191bp) protein (397aa)
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF {ECO:0000313|EMBL:EWS61924.1}; EC=2.8.3.15 {ECO:0000313|EMBL:EWS61924.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJD7_METPP
hypothetical protein
H2-16-all-fractions_k255_5422756_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17357..18271
DNA (915bp) protein (305aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Putative hydroxymethylglutaryl-CoA lyase n=4 Tax=Bordetella RepID=K0MDK2_BORPB
HMGL-like protein {ECO:0000313|EMBL:KCV64338.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
H2-16-all-fractions_k255_5422756_17
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18348..19685
DNA (1338bp) protein (446aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YQ65_9BURK
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADX58182.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
H2-16-all-fractions_k255_5422756_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19699..20526)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Caldimonas manganoxidans RepID=UPI00035F1566
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_5422756_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20529..21437)
DNA (909bp) protein (303aa)
mannosyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003767FB6
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACS18962.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
H2-16-all-fractions_k255_5422756_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21434..22462)
DNA (1029bp) protein (343aa)
ABC transporter substrate-binding protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036D4997
putative ABC transporter substrate binding protein
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:BAL93464.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_5422756_21
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22579..22965)
DNA (387bp) protein (129aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=DXS_METPP
Displaying 21 items

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