ggKbase home page

H2-16-all-fractions_k255_5451776

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_5451776_1

Not on your lists

1..567
DNA (567bp) protein (189aa)
Isocitrate lyase {ECO:0000313|EMBL:CBH97914.1}; EC=4.1.3.1 {ECO:0000313|EMBL:CBH97914.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aceA; isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=mine drainage metagenome RepID=E6PSK7_9ZZZZ
H2-16-all-fractions_k255_5451776_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(659..1780)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U3_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68460.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
H2-16-all-fractions_k255_5451776_3
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1777..2694)
DNA (918bp) protein (306aa)
Hpr(Ser) kinase/phosphatase {ECO:0000313|EMBL:ABD68459.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABD68459.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Hpr(Ser) kinase/phosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U4_RHOFD
HPr kinase
H2-16-all-fractions_k255_5451776_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2691..2978)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL59_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93746.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_5451776_5
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2998..3651)
DNA (654bp) protein (218aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U6_RHOFD
twin-arginine translocation pathway signal protein
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABD68457.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
H2-16-all-fractions_k255_5451776_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3700..5094)
DNA (1395bp) protein (465aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNN7_9BURK
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EHR72011.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
H2-16-all-fractions_k255_5451776_7
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5461..7563
DNA (2103bp) protein (701aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U9_RHOFD
periplasmic sensor signal transduction histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
H2-16-all-fractions_k255_5451776_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7560..8927
DNA (1368bp) protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U8_RHOFD
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
H2-16-all-fractions_k255_5451776_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8975..11734
DNA (2760bp) protein (920aa)
Tetratricopeptide TPR_2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220U7_RHOFD
hypothetical protein
Tax=CG_Rhodof_02
H2-16-all-fractions_k255_5451776_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11712..12230)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FV56_PHAMO
protein tyrosine phosphatase
Tax=CG_Rhodof_02
H2-16-all-fractions_k255_5451776_11
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12298..12981)
DNA (684bp) protein (228aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000313|EMBL:KFC66136.1}; EC=2.1.1.163 {ECO:0000313|EMBL:KFC66136.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036EBB74
type 11 methyltransferase
H2-16-all-fractions_k255_5451776_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13271..14083
DNA (813bp) protein (271aa)
hypothetical protein id=12493046 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PEP-CTERM motif-containing protein {ECO:0000313|EMBL:KFC66135.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H2-16-all-fractions_k255_5451776_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14241..15104
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN18_9BURK
moeB; molybdopterin biosynthesis protein
Tax=CG_Rhodof_02
H2-16-all-fractions_k255_5451776_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15351..15983
DNA (633bp) protein (211aa)
Putative polysaccharide export protein, PEP-CTERM sytem-associated n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNM6_9BURK
Putative polysaccharide export protein, PEP-CTERM sytem-associated {ECO:0000313|EMBL:EHR72009.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
polysaccharide export protein
H2-16-all-fractions_k255_5451776_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16076..17668
DNA (1593bp) protein (531aa)
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNM5_9BURK
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily {ECO:0000313|EMBL:EHR72008.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
lipopolysaccharide biosynthesis
H2-16-all-fractions_k255_5451776_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17670..18596
DNA (927bp) protein (309aa)
Protein-tyrosine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL68_RUBGI
protein-tyrosine kinase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_5451776_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18596..20170
DNA (1575bp) protein (525aa)
Uncharacterized protein, PEP-CTERM system associated n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNM3_9BURK
Uncharacterized protein, PEP-CTERM system associated {ECO:0000313|EMBL:EHR72006.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
H2-16-all-fractions_k255_5451776_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20174..21289
DNA (1116bp) protein (372aa)
ATPase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN13_9BURK
ATPase {ECO:0000313|EMBL:EGJ09731.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative nucleoside-triphosphatase
H2-16-all-fractions_k255_5451776_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21286..22449
DNA (1164bp) protein (388aa)
wecB; UDP-N-acetylglucosamine 2-epimerase WecB (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase WecB {ECO:0000313|EMBL:BAL93758.1}; EC=5.1.3.14 {ECO:0000313|EMBL:BAL93758.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
UDP-N-acetylglucosamine 2-epimerase WecB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL71_RUBGI
H2-16-all-fractions_k255_5451776_20
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22460..23326
DNA (867bp) protein (289aa)
Polysaccharide deacetylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220Y8_RHOFD
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
H2-16-all-fractions_k255_5451776_21
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23326..24372
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DX01_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
H2-16-all-fractions_k255_5451776_22
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24369..25973
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220Y6_RHOFD
hypothetical protein
Tax=CG_Rhodof_03
H2-16-all-fractions_k255_5451776_23
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25970..27130
DNA (1161bp) protein (387aa)
Putative glycosyltransferase EpsF {ECO:0000313|EMBL:EXI76745.1}; EC=2.4.-.- {ECO:0000313|EMBL:EXI76745.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
Sugar transferase, PEP-CTERM/EpsH1 system associated n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT02_ACCPU
sugar transferase
H2-16-all-fractions_k255_5451776_24
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27214..29157
DNA (1944bp) protein (648aa)
Asparagine synthetase [glutamine-hydrolyzing] 1 {ECO:0000313|EMBL:EXI88316.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EXI88316.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
exosortase 1 system-associated amidotransferase 1 (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT03_ACCPU
H2-16-all-fractions_k255_5451776_25
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29210..30427
DNA (1218bp) protein (406aa)
2-deoxystreptamine glucosyltransferase {ECO:0000313|EMBL:EXI77236.1}; EC=2.4.1.284 {ECO:0000313|EMBL:EXI77236.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
Glycosyl transferase, group 1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220Y2_RHOFD
group 1 glycosyl transferase
H2-16-all-fractions_k255_5451776_26
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30455..31684
DNA (1230bp) protein (410aa)
Sugar transferase, PEP-CTERM/EpsH1 system associated n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT06_ACCPU
sugar transferase
Sugar transferase, PEP-CTERM/EpsH1 system associated {ECO:0000313|EMBL:ACV34749.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
H2-16-all-fractions_k255_5451776_27
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31681..32904
DNA (1224bp) protein (408aa)
Putative teichuronic acid biosynthesis glycosyltransferase TuaC {ECO:0000313|EMBL:EXI77248.1}; EC=2.4.-.- {ECO:0000313|EMBL:EXI77248.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000366EE1D
group 1 glycosyl transferase
H2-16-all-fractions_k255_5451776_28
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32897..34213
DNA (1317bp) protein (439aa)
O-antigen polymerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220X5_RHOFD
O-antigen polymerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
H2-16-all-fractions_k255_5451776_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34236..35291)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00035EE102
hypothetical protein
Tax=CG_Rhodof_02
H2-16-all-fractions_k255_5451776_30
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35329..37008)
DNA (1680bp) protein (560aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:AAZ47163.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AAZ47163.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Asparagine synthase (Glutamine-hydrolysing) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DB8_DECAR
Displaying items 1-30 of 31 in total

View Taxonomy