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H2-16-all-fractions_k255_5891008

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_5891008_1
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..989)
DNA (987bp) protein (329aa)
Candidate transporter n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5C6_RAMTT
transporter
Candidate transporter {ECO:0000313|EMBL:AEG91436.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
H2-16-all-fractions_k255_5891008_2
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1187..2110
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000376A876
LysR family transcriptional regulator
Transcriptional regulator, LysR family-like protein {ECO:0000313|EMBL:AEG91437.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
H2-16-all-fractions_k255_5891008_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2144..3007)
DNA (864bp) protein (288aa)
Transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNB1_SORCE
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGP32148.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
H2-16-all-fractions_k255_5891008_4
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3111..4019
DNA (909bp) protein (303aa)
putative hydrolase (EC:3.3.2.10)
Putative hydrolase {ECO:0000313|EMBL:AEK63213.1}; EC=3.3.2.10 {ECO:0000313|EMBL:AEK63213.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Putative hydrolase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AD29_COLFT
H2-16-all-fractions_k255_5891008_5
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4006..5790
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036285AF
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG85590.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H2-16-all-fractions_k255_5891008_6
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5866..6855)
DNA (990bp) protein (330aa)
LysR family transcriptional regulator (EC:4.2.1.1)
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003686B72
Transcriptional regulator {ECO:0000313|EMBL:GAN52167.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
H2-16-all-fractions_k255_5891008_7
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6959..7981
DNA (1023bp) protein (341aa)
Putative zinc-binding oxidoreductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NXB3_9DELT
Alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:AHF79252.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
H2-16-all-fractions_k255_5891008_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7989..9224)
DNA (1236bp) protein (412aa)
alpha/beta hydrolase fold protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174603B
alpha/beta hydrolase family protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AIC27898.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
H2-16-all-fractions_k255_5891008_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9292..10419)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTX9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM27421.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
H2-16-all-fractions_k255_5891008_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10603..11436
DNA (834bp) protein (278aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0Y3_RAMTT
dehydrogenase-like protein
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)-like protein {ECO:0000313|EMBL:AEG92201.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
H2-16-all-fractions_k255_5891008_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11759..12370
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y112_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92230.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
H2-16-all-fractions_k255_5891008_12
unknown

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comp(12756..13736)
DNA (981bp) protein (327aa)

This feature has no annotations

H2-16-all-fractions_k255_5891008_13
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13821..14303)
DNA (483bp) protein (161aa)
Type VI secretion system effector, Hcp1 family n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A6J0_METMM
type VI secretion system effector
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:AEF99291.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
H2-16-all-fractions_k255_5891008_14
Radopholus similis, Radopholus, Tylenchida, Chromadorea, Nematoda, Metazoa

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comp(14605..16140)
DNA (1536bp) protein (512aa)
Glucosylceramidase {ECO:0000256|RuleBase:RU361188}; EC=3.2.1.45 {ECO:0000256|RuleBase:RU361188};; TaxID=46012 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus.;" source="Radopholus similis (Burrowing nematode).;"
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037ED0D7
putative xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain)
Displaying 14 items

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