ggKbase home page

H2-16-all-fractions_k255_6751128

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_6751128_1
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..837
DNA (837bp) protein (279aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein RadA n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B7A6A5
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
H2-16-all-fractions_k255_6751128_2
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(928..1338)
DNA (411bp) protein (137aa)
Hypothetical membrane protein id=4064465 bin=GWF2_Bacteroidetes_42_66 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
H2-16-all-fractions_k255_6751128_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1421..2254
DNA (834bp) protein (278aa)
Metallophosphoesterase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUY4_VARPE
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31701.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
metallophosphoesterase
H2-16-all-fractions_k255_6751128_4
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..2776)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000376AB6C
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:AFU99214.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 /; SA1).;"
H2-16-all-fractions_k255_6751128_5
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2866..3789
DNA (924bp) protein (308aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42 2.6.1.-)
Branched chain amino acid aminotransferase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase {ECO:0000313|EMBL:ABM96505.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABM96505.1};; EC=2.6.1.42 {ECO:0000313|EMBL:ABM96505.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
branched-chain amino acid aminotransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI00037FF639
H2-16-all-fractions_k255_6751128_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4033
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346849F
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69093.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
H2-16-all-fractions_k255_6751128_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4048..5619
DNA (1572bp) protein (524aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
histidine kinase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000347BCBB
H2-16-all-fractions_k255_6751128_8
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5681..6619)
DNA (939bp) protein (313aa)
glycosyl transferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346842C
Glycosyl transferase family protein {ECO:0000313|EMBL:KDB50407.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
glycosyl transferase family protein
H2-16-all-fractions_k255_6751128_9
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6687..7574)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2M4Y1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL92828.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
hypothetical protein
H2-16-all-fractions_k255_6751128_10
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7571..8968)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E67676
Cardiolipin synthase {ECO:0000313|EMBL:KFX68291.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
putative cardiolipin synthase
H2-16-all-fractions_k255_6751128_11
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9063..9959
DNA (897bp) protein (299aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
Formyltetrahydrofolate deformylase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y667_LEPCP
formyltetrahydrofolate deformylase
H2-16-all-fractions_k255_6751128_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9976..10425
DNA (450bp) protein (150aa)
Ketosteroid isomerase-like enzyme n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUR7_9BURK
Ketosteroid isomerase-like enzyme {ECO:0000313|EMBL:EHR69627.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
H2-16-all-fractions_k255_6751128_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10484..11500
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037F03F8
Alpha/beta hydrolase {ECO:0000313|EMBL:KJA10898.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
alpha/beta hydrolase fold protein
H2-16-all-fractions_k255_6751128_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11561..12133
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVN1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12399.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
H2-16-all-fractions_k255_6751128_15
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12189..12785)
DNA (597bp) protein (199aa)
Putative cytochrome c n=3 Tax=Bordetella bronchiseptica RepID=K0MYN6_BORBM
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:CCN25136.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
Displaying 15 items

View Taxonomy