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H2-18-all-fractions_k255_2500995

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_2500995_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1..1725)
DNA (1725bp) protein (575aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Transcription-repair-coupling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF5_CONWI
transcription-repair coupling factor
H2-18-all-fractions_k255_2500995_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1773..2369)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI00037F3AF3
spoV; peptidyl-tRNA hydrolase, PTH1 family
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_3
R_WOR_2_67_20, WOR-2, Bacteria

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comp(2369..3097)
DNA (729bp) protein (243aa)
50S ribosomal protein L25 n=1 Tax=Patulibacter medicamentivorans RepID=H0E932_9ACTN
50S ribosomal protein L25
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
H2-18-all-fractions_k255_2500995_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3117..3299)
DNA (183bp) protein (61aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-18-all-fractions_k255_2500995_5
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(3341..4396)
DNA (1056bp) protein (352aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Patulibacter americanus RepID=UPI0003B3C70E
Tax=RBG_13_Actinobacteria_55_18_curated
H2-18-all-fractions_k255_2500995_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4377..5690)
DNA (1314bp) protein (438aa)
Bifunctional protein GlmU n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7J4_THECD
UDP-N-acetylglucosamine pyrophosphorylase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
H2-18-all-fractions_k255_2500995_7
unknown

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comp(5781..6152)
DNA (372bp) protein (124aa)

This feature has no annotations

H2-18-all-fractions_k255_2500995_8
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6157..6963)
DNA (807bp) protein (269aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LJE1_THEPS
H2-18-all-fractions_k255_2500995_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(6960..7709)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
dimethyladenosine transferase (EC:2.1.1.-)
dimethyladenosine transferase n=1 Tax=Patulibacter americanus RepID=UPI0003B5FCA5
H2-18-all-fractions_k255_2500995_10
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7706..8440)
DNA (735bp) protein (245aa)
hydrolase TatD
Hydrolase TatD {ECO:0000313|EMBL:AJF07955.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
Magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase id=4542147 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
H2-18-all-fractions_k255_2500995_11
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists


comp(8437..10230)
DNA (1794bp) protein (598aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
Methionine--tRNA ligase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEC6_9CHLR
methionyl-tRNA synthetase
H2-18-all-fractions_k255_2500995_12
unknown

Not on your lists

10499..11350
DNA (852bp) protein (284aa)

This feature has no annotations

H2-18-all-fractions_k255_2500995_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11332..12135)
DNA (804bp) protein (268aa)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH7_CONWI
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12136..13032)
DNA (897bp) protein (299aa)
ROK family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH8_CONWI
ROK family protein
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13058..14233
DNA (1176bp) protein (392aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SER4_INTC7
cell envelope-related transcriptional attenuator
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14230..14511)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWT4_RAMTT
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14517..16085
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZB23_9EURY
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16074..16277)
DNA (204bp) protein (68aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16295..17098
DNA (804bp) protein (268aa)
PfkB domain-containing protein id=14628771 bin=bin8_Chloro species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
ribokinase-like domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_2500995_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17095..17922
DNA (828bp) protein (276aa)
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XNQ6_9PSEU
psuG; indigoidine synthase A-like protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 20 items

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